Miyakogusa Predicted Gene
- Lj3g3v2984970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2984970.1 tr|G7IW90|G7IW90_MEDTR NB-LRR type disease
resistance protein Rps1-k-2 OS=Medicago truncatula
GN=MTR,67.55,0,NB-ARC,NB-ARC; no description,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; DISEA,CUFF.45059.1
(1359 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79449 similar to UniRef100_Q2YE87 Cluster: NBS-LRR ty... 311 6e-84
gnl|LJGI|GO040264 similar to UniRef100_Q2YE87 Cluster: NBS-LRR t... 202 4e-51
gnl|LJGI|GO035198 weakly similar to UniRef100_A7QRC9 Cluster: Ch... 172 4e-42
gnl|LJGI|DC592854 weakly similar to UniRef100_A7QRA9 Cluster: Ch... 165 9e-40
gnl|LJGI|GO026128 weakly similar to UniRef100_A7QRD2 Cluster: Ch... 149 5e-35
gnl|LJGI|BP056393 similar to UniRef100_Q2YE88 Cluster: NBS-LRR t... 143 3e-33
>gnl|LJGI|TC79449 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance
protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-2 - Glycine max
(Soybean), partial (19%)
Length = 793
Score = 311 bits (157), Expect = 6e-84
Identities = 347/413 (84%)
Strand = Plus / Plus
Query: 822 tgaagattgttggttggtgtttacaaatcatgcatgtatttcctctggaccttttgagaa 881
|||||||||||||| ||| ||| |||||||||||||| ||| | | ||| ||||||
Sbjct: 154 tgaagattgttggtcggtatttgcaaatcatgcatgtcttttcccaggattaggtgagaa 213
Query: 882 tacaacagctttgaagaaaattggcatggagattgttaaaaagtgtaagggattgccttt 941
||||| ||||||| ||||||||||| ||||||||||||| |||||||||||| | |||||
Sbjct: 214 tacaatagctttggagaaaattggcttggagattgttaagaagtgtaagggactaccttt 273
Query: 942 agcagcacaatcacttggaggtatattgcgaagaaagcaggatattagggattggaataa 1001
||| |||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||
Sbjct: 274 agcggcacaatcacttggaggtttattgagaagaaagcataacattaaggattggaataa 333
Query: 1002 tatactaaatagtgatatttggcaattatctgaaagtgaaagcaaaattattccagcttt 1061
| || | ||| |||| |||||| || ||||||||||||||||||| ||||| ||| | ||
Sbjct: 334 tgtattgaattgtgacatttgggaactatctgaaagtgaaagcaagattataccatcatt 393
Query: 1062 gagaatcagttatcattatctcccttctcatttgaaacgttgctttgtttattgttcatt 1121
|||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 394 gagaatcagttatcattatctcccttcttatttgaaacgttgctttgcttatttctcatt 453
Query: 1122 gtttccaaaagattatgaatttgnnnnnnnngaattgatcttgttgtggatggctgaaga 1181
| ||| |||||||||||||||| || | ||| || |||||||||| |||||
Sbjct: 454 atatcctaaagattatgaatttgaaaaaaatgatgtaatcctgctgtggatggccgaaga 513
Query: 1182 tctcttaccgccaccaaaaacaggaaatactttagaagaagttggttatgagt 1234
||| ||||| ||||||||| |||||| ||||| | ||||||||| ||||||
Sbjct: 514 tcttttaccaccaccaaaacaaggaaaaactttgaacgaagttggtgatgagt 566
>gnl|LJGI|GO040264 similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease resistance
protein Rps1-k-2; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-2 - Glycine max
(Soybean), partial (20%)
Length = 890
Score = 202 bits (102), Expect = 4e-51
Identities = 226/266 (84%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 822 tgaagattgttggttggtgtttacaaatcatgcatgtatttcctctggaccttttgagaa 881
|||| ||||||||| ||||||| ||| ||||||||| |||| ||| || ||||||
Sbjct: 286 tgaacattgttggtcggtgtttgaaaaccatgcatgtctttctcaaggatctggtgagaa 227
Query: 882 tacaacagctttgaagaaaa-ttggcatggagattgttaaaaagtgtaagggattgcctt 940
| |||||||| | |||||| ||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 226 tgcaacagctctagagaaaaattggcttggagattgttaagaagtgtaagggacttcctt 167
Query: 941 tagcagcacaatcacttggaggtatattgcgaagaaagcaggatattagggattggaata 1000
|||| ||||||||||| |||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 166 tagctgcacaatcactcggaggtttattgagaagaaagcgtgatattagggattggaata 107
Query: 1001 atatactaaatagtgatatttggcaattatctgaaagtgaaagcaaaattattccagctt 1060
|| |||| ||||||| |||||| ||||| |||| |||| ||| || ||||||||| | |
Sbjct: 106 atgtactgtatagtgacatttgggaattacctgacagtggaagtaagattattccatcat 47
Query: 1061 tgagaatcagttatcattatctccct 1086
||||||||||||||||||||||||||
Sbjct: 46 tgagaatcagttatcattatctccct 21
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 640 tttgattttaaagcatgggtttgtgtttctgaacaatttgatatcatgagggttacaaaa 699
||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |||
Sbjct: 612 tttgattccaaagcatgggtttgtgtttctgaagcatttgatatcgtgagggttacgaaa 553
Query: 700 a 700
|
Sbjct: 552 a 552
>gnl|LJGI|GO035198 weakly similar to UniRef100_A7QRC9 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 373
Score = 172 bits (87), Expect = 4e-42
Identities = 289/354 (81%), Gaps = 13/354 (3%)
Strand = Plus / Plus
Query: 47 atgttgtttttgacaggctggcttcacctcaggttgtcaatatgatccgagggaagaagc 106
||||||| || |||||||| | |||||||| |||||||| | ||||||||||||||||
Sbjct: 23 atgttgtcttcgacaggcttgattcacctcttgttgtcaacttcatccgagggaagaagc 82
Query: 107 ttgaccccaagatgcttcaaaggttggagacaactctgaaagtggttagagtggtgctta 166
||| ||| | ||| |||||||| |||||||||| |||||||| |||| ||||| |
Sbjct: 83 ttggccctt---tacttgaaaggttgaagacaactctcaaagtggtcagagctgtgctca 139
Query: 167 atgatgctgagaagaaacagatcagagattctgatgtcaacagctggctcgatgatctca 226
|||||||||||||||||||||| | ||| |||||||| || ||||| | ||| ||||
Sbjct: 140 atgatgctgagaagaaacagattacagactctgatgttaaagactggcccagtgaactca 199
Query: 227 aagatgttgtctacatggctgatgacttgttggatgaaatttttaccaaag------ctg 280
|| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||
Sbjct: 200 aacatgttgtctacatggctgatgacttgttggatgaagtttctaccaaagctgctactg 259
Query: 281 caactcaacaggaggta---agtaacttgttctctcgccttttcaatgtgcaagataggg 337
|||||||| |||||||| | |||||| |||||||| ||||||||| |||||| |||
Sbjct: 260 caactcaaaaggaggtaactactaacttcatctctcgctttttcaatgcacaagatgggg 319
Query: 338 agatggcgggtaggttgga-agacatagttgacaaactagaatatatcttaaaa 390
| ||||| |||||||| | | | |||||||| |||||||| |||| ||||||
Sbjct: 320 atatggctagtaggttgaagaaaaatagttgataaactagagcatatattaaaa 373
>gnl|LJGI|DC592854 weakly similar to UniRef100_A7QRA9 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 566
Score = 165 bits (83), Expect = 9e-40
Identities = 220/265 (83%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 17 tggggggagcttttctcagtgcttttattgatgttgtttttgacaggctggcttcacctc 76
|||| |||||||| ||| |||| || || |||||||||| |||| ||| |||||||||
Sbjct: 39 tgggaggagctttcctcggtgcattccttaatgttgttttcgacaagcttgcttcacctg 98
Query: 77 aggttgtcaatatgatccgagggaagaagcttgaccccaagatgcttcaaaggttggaga 136
|||||||||| | |||||||| |||||||||| ||| | ||| | ||| || |||
Sbjct: 99 aggttgtcaacttcatccgaggcaagaagcttggccctt---tacttgacaggatgaaga 155
Query: 137 caactctgaaagtggttagagtggtgcttaatgatgctgagaagaaacagatcagagatt 196
||||||| | |||||| | || ||||| |||||||||||||||||||||||||| || |
Sbjct: 156 caactctcacagtggtcaaagctgtgctcaatgatgctgagaagaaacagatcagtgact 215
Query: 197 ctgatgtcaacagctggctcgatgatctcaaagatgttgtctacatggctgatgacttgt 256
|||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 216 ctgatgtcaaagactggctcgatgaactcaaacatgttgtctacatggctgatgacttga 275
Query: 257 tggatgaaatttttaccaaagctgc 281
||||| | ||| ||||||||||||
Sbjct: 276 tggatcatgtttgtaccaaagctgc 300
Score = 105 bits (53), Expect = 7e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 348 taggttggaagacatagttgacaaactagaatatatcttaaaactcaaggagagtcttga 407
|||||||||||| ||||||||||| ||||| ||||||||||||| || |||||||||||
Sbjct: 433 taggttggaagaaatagttgacaagctagagcatatcttaaaactaaaagagagtcttga 492
Query: 408 tctcaaagagattgtaatgga 428
|||||||||||||| ||||||
Sbjct: 493 tctcaaagagattgcaatgga 513
>gnl|LJGI|GO026128 weakly similar to UniRef100_A7QRD2 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 762
Score = 149 bits (75), Expect = 5e-35
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 160 gtgcttaatgatgctgagaagaaacagatcagagattctgatgtcaacagctggctcgat 219
|||||| ||||||||||||| ||||||||||| | ||| ||||||||| |||||| ||
Sbjct: 270 gtgcttgatgatgctgagaacaaacagatcagtaactctaatgtcaacaagtggctcaat 329
Query: 220 gatctcaaagatgttgtctacatggctgatgacttgttggatgaaatttttaccaaagct 279
|| ||||||| ||||||||||||||||||||||||| |||||||| ||| ||||| ||||
Sbjct: 330 gaactcaaagttgttgtctacatggctgatgacttgctggatgaagtttctaccatagct 389
Query: 280 gcaactcaacaggaggtaa 298
||||||||| |||||||||
Sbjct: 390 gcaactcaaaaggaggtaa 408
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 381 tatcttaaaactcaaggagagtcttgatctcaaagagattg 421
||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 458 tatcttaaaactcaaagtgagtcttaatctcaaagagattg 498
>gnl|LJGI|BP056393 similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease resistance
protein Rps1-k-1; n=1; Glycine max|Rep: NBS-LRR type
disease resistance protein Rps1-k-1 - Glycine max
(Soybean), partial (9%)
Length = 421
Score = 143 bits (72), Expect = 3e-33
Identities = 186/225 (82%)
Strand = Plus / Plus
Query: 913 attgttaaaaagtgtaagggattgcctttagcagcacaatcacttggaggtatattgcga 972
|||||||||| ||||||||| | |||||| | ||||||||||||||||| ||||||||
Sbjct: 133 attgttaaaaggtgtaaggggtcacctttancggcacaatcacttggaggcttattgcga 192
Query: 973 agaaagcaggatattagggattggaataatatactaaatagtgatatttggcaattatct 1032
| ||||| ||||| || || || || |||||| | ||||| | |||||| || | ||
Sbjct: 193 gggaagcatgatatcagagactgnaacaatatattgaatagcaacatttgggaacttcct 252
Query: 1033 gaaagtgaaagcaaaattattccagctttgagaatcagttatcattatctcccttctcat 1092
|||| ||| ||||| ||||||| ||| |||||||| |||||||||||||| ||| | |||
Sbjct: 253 gaaaatgagagcaatattattctagcattgagaattagttatcattatctacctccacat 312
Query: 1093 ttgaaacgttgctttgtttattgttcattgtttccaaaagattat 1137
|||||||||| || |||||||||||||||||||| || ||||||
Sbjct: 313 ctgaaacgttgtttngtttattgttcattgtttccgaaggattat 357