Miyakogusa Predicted Gene

Lj3g3v2970750.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2970750.1 tr|Q9FMS3|Q9FMS3_ARATH At5g22280 OS=Arabidopsis
thaliana GN=At5g22280/MWD9.6 PE=4 SV=1,52.04,2e-19,coiled-coil,NULL;
seg,NULL,CUFF.45037.1
         (318 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome...   117   4e-26
gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome...    74   6e-13

>gnl|LJGI|TC66106 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
           scaffold_87, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (90%)
          Length = 766

 Score =  117 bits (59), Expect = 4e-26
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 142 gaaagtgtaaaggagaagattattttagtgcaagagcaaaatattcgaagattgagtgag 201
           |||| ||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||
Sbjct: 464 gaaactgtaaaggagaagattattttagtgcaagagaagaatattcgaagactgaatgag 523

                                                  
Query: 202 cttgtgaggcatcttcaggaacaactgaagctgtgtaga 240
           || ||| ||||||| |||||||||||| ||| |||||||
Sbjct: 524 ctcgtgcggcatctccaggaacaactgcagcagtgtaga 562



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgagggccatgttgcttgttttcttgctgctcatacttataaccacctctcagttt 60
           ||||||||| | ||| ||||||| ||||||||| | |||||||||| |||||| ||||||
Sbjct: 323 atgtcgaggcctatgctgcttgtcttcttgctgattatacttataatcacctcacagttt 382

                        
Query: 61  gagtggaagcaac 73
           |||||||| ||||
Sbjct: 383 gagtggaaacaac 395


>gnl|LJGI|TC65888 similar to UniRef100_A7QF57 Cluster: Chromosome undetermined
           scaffold_87, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (49%)
          Length = 733

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgagggccatgttgcttgttttcttgctgctcatacttataaccacctctcagttt 60
           ||||||||| ||||| ||||||| ||||| ||| | |||||||||| |||||| ||||||
Sbjct: 453 atgtcgaggtccatgctgcttgtcttcttactgattatacttataatcacctcacagttt 512

                        
Query: 61  gagtggaagcaac 73
           |||||||| ||||
Sbjct: 513 gagtggaaacaac 525