Miyakogusa Predicted Gene
- Lj3g3v2948510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2948510.1 Non Chatacterized Hit- tr|I1LKM2|I1LKM2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45889
PE,71.87,0,HLH,Helix-loop-helix domain; seg,NULL;
bHLH-MYC_N,Transcription factor MYC/MYB N-terminal; GB DEF:
B,CUFF.45631.1
(2862 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 1744 0.0
gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loo... 297 2e-79
gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 186 5e-46
gnl|LJGI|TC79643 similar to UniRef100_A7PGE2 Cluster: Chromosome... 92 2e-17
>gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(30%)
Length = 1157
Score = 1744 bits (880), Expect = 0.0
Identities = 890/892 (99%), Gaps = 1/892 (0%)
Strand = Plus / Plus
Query: 1972 ccctctccatcctgcaagcaggttatgtctgatcatgttgcccagggagcattgtttgat 2031
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 13 ccctctccatcctgcaagcaggttatgtctgatcttgttgcccagggagcattgtttgat 72
Query: 2032 tttcctaagatggggactaaaacaggtgctgtggaagcaagttctcttcggtcagggtgt 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttcctaagatggggactaaaacaggtgctgtggaagcaagttctcttcggtcagggtgt 132
Query: 2092 agcaagggtgatgctggaaactgttctcaaagtacttccatatatgggtctcaacttagt 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcaagggtgatgctggaaactgttctcaaagtacttccatatatgggtctcaacttagt 192
Query: 2152 tcatgggttgacgacagcagcaatgtgaagcgtgaaaatagtgcttcaactggatactct 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcatgggttgacgacagcagcaatgtgaagcgtgaaaatagtgcttcaactggatactct 252
Query: 2212 aagaggccggatgaagcaggcaaaacaaatcgtaaacggcttaaaccaggagagaacccc 2271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aagaggccggatgaagcaggcaaaacaaatcgtaaacggcttaaaccaggagagaacccc 312
Query: 2272 aggcctcgacctaaagatcgtcaaatgattcaagatcgtgtgaaagagttgagggaaatt 2331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggcctcgacctaaagatcgtcaaatgattcaagatcgtgtgaaagagttgagggaaatt 372
Query: 2332 gtgcctaatgga-gcaaaatgtagcatagatgcacttctggaacggaccatcaagcatat 2390
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgcctaatggaagcaaaatgtagcatagatgcacttctggaacggaccatcaagcatat 432
Query: 2391 gcttttcttgcagagtgttacgaagcatgctgacaagttgaaacagacaggggaatctaa 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttttcttgcagagtgttacgaagcatgctgacaagttgaaacagacaggggaatctaa 492
Query: 2451 gattgtgagtaaagaaggtggattgctcttaaaagataactttgagggaggggctacttg 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gattgtgagtaaagaaggtggattgctcttaaaagataactttgagggaggggctacttg 552
Query: 2511 ggcatatgaggttggctcacaatcaatggtgtgccctatcatagttgaggatcttaatcc 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggcatatgaggttggctcacaatcaatggtgtgccctatcatagttgaggatcttaatcc 612
Query: 2571 tcctcgccagatgctagtggagatgctctgcgaggaacgaggtttctttctggaaatagc 2630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcctcgccagatgctagtggagatgctctgcgaggaacgaggtttctttctggaaatagc 672
Query: 2631 tgacttaataagaggattaggtttaacaatcttgaagggggtcatggaagcccgcaatga 2690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgacttaataagaggattaggtttaacaatcttgaagggggtcatggaagcccgcaatga 732
Query: 2691 caagatctgggcacgctttgctgttgaggcaaacagggatgtgacaaggatggaaatatt 2750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 caagatctgggcacgctttgctgttgaggcaaacagggatgtgacaaggatggaaatatt 792
Query: 2751 catgtcactagttcaacttgtggaacaaacagtgaagggtggtgcatcttcatctaatgc 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 catgtcactagttcaacttgtggaacaaacagtgaagggtggtgcatcttcatctaatgc 852
Query: 2811 agttgacaacaacatgatggtttatcattctttcccgcaagccacctagata 2862
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 agttgacaacaacatgatggtttatcattctttcccgcaagccacctagata 904
>gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(25%)
Length = 751
Score = 297 bits (150), Expect = 2e-79
Identities = 261/298 (87%)
Strand = Plus / Minus
Query: 2174 atgtgaagcgtgaaaatagtgcttcaactggatactctaagaggccggatgaagcaggca 2233
|||||||| |||||||||||| ||||||||||||||| ||| | || ||||| || |
Sbjct: 388 atgtgaagtgtgaaaatagtgtttcaactggatactcgaagcagtcgcgcgaagctggta 329
Query: 2234 aaacaaatcgtaaacggcttaaaccaggagagaaccccaggcctcgacctaaagatcgtc 2293
|| ||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||| |
Sbjct: 328 aatcaaatcgtaaaaggcttaaactaggagagaatcccaggcctcgaccaaaagatcgcc 269
Query: 2294 aaatgattcaagatcgtgtgaaagagttgagggaaattgtgcctaatggagcaaaatgta 2353
|||||||||||||||||||||||||| | | ||| ||||||| ||||||| ||||||||
Sbjct: 268 aaatgattcaagatcgtgtgaaagagctacgagaacttgtgccaaatggagaaaaatgta 209
Query: 2354 gcatagatgcacttctggaacggaccatcaagcatatgcttttcttgcagagtgttacga 2413
||||||||||||| |||||| ||||||| |||||||||| |||| |||| ||||| || |
Sbjct: 208 gcatagatgcactactggaaaggaccataaagcatatgcgtttcatgcaaagtgtgacaa 149
Query: 2414 agcatgctgacaagttgaaacagacaggggaatctaagattgtgagtaaagaaggtgg 2471
|||||||||||||| |||||||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 148 agcatgctgacaagctgaaacagacaggggagtctaagattattagtaaggaaggtgg 91
>gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (17%)
Length = 899
Score = 186 bits (94), Expect = 5e-46
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 1 atggggttcttgttgaaagaagctttgaagactctgtgtgctcggaatcagtggtcttat 60
|||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct: 423 atggggtttttgttgaaagaagctttgaagtctctgtgtgatcggaaccagtggtcttat 482
Query: 61 gctgtgttctggaagatcgggtgtaataattccaagctgttaatctgggaagattgctac 120
||||| |||||||||||||| ||| | ||||||||||||||||| ||||||||||||||
Sbjct: 483 gctgttttctggaagatcggttgtcaaaattccaagctgttaatttgggaagattgctat 542
Query: 121 tatgaacctttgtcatctcctttccctcaacgta 154
|||||||| ||| ||| ||| ||||||| |||||
Sbjct: 543 tatgaacccttgccatgtccattccctccacgta 576
Score = 129 bits (65), Expect = 1e-28
Identities = 242/301 (80%)
Strand = Plus / Plus
Query: 214 tctcagctgcggaatcaggaggaggacagagtctgttcattggttaatagaatgatggtg 273
|||||||| ||| ||| ||||||||||||||| |||| ||| |||| | |||| ||
Sbjct: 591 tctcagctagggattcaagaggaggacagagtcggttctttgattaacaaaatggcagta 650
Query: 274 aataattcagtcaatatcactggtgaagggatacttggacgggcagcgtttacaggaaat 333
|||||||||||| | | | |||||||| || |||||||||| || ||| |||| |
Sbjct: 651 aataattcagtcgttgttgcaggtgaaggtatgattggacgggctgcattttcaggcagc 710
Query: 334 catcagtggattctttttaacaatttcactagtgatgcatatccaccagatgtatgtaca 393
||||||||||||||||| |||||||||||| |||||||||||||| || ||| | |
Sbjct: 711 catcagtggattcttttgtacaatttcactacagatgcatatccacctgaggtaaatgct 770
Query: 394 gagttgcatcaccaattttcagctggaatgcagacggtagcggttattcctgtgcttccc 453
|| || ||||||| ||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 771 gaagtgtttcaccaaatttcagctggaatgcagacagtagcagttattcctgtgctgcct 830
Query: 454 catggggttgtccaacttggatctatcttgcctattatggaaaatatgagatttgtgaat 513
|| || ||||| |||||||| || ||||||| || ||||| ||| || ||||| |||||
Sbjct: 831 cacggcgttgttcaacttggttcattcttgccaataatggagaatttgggatttttgaat 890
Query: 514 g 514
|
Sbjct: 891 g 891
>gnl|LJGI|TC79643 similar to UniRef100_A7PGE2 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 695
Score = 91.7 bits (46), Expect = 2e-17
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 2817 caacaacatgatggtttatcattctttcccgcaagccacctagata 2862
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caacaacatgatggtttatcattctttcccgcaagccacctagata 47