Miyakogusa Predicted Gene
- Lj3g3v2927360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2927360.1 Non Chatacterized Hit- tr|D8RJA2|D8RJA2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,44.55,3e-19,E1_DerP2_DerF2,MD-2-related lipid-recognition;
seg,NULL; Domain involved in innate immunity and lipi,CUFF.45018.1
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59455 weakly similar to UniRef100_A7QF45 Cluster: Chr... 892 0.0
gnl|LJGI|BW599378 452 e-127
gnl|LJGI|TC76893 137 7e-32
gnl|LJGI|TC65206 weakly similar to UniRef100_A7Q077 Cluster: Chr... 62 3e-09
gnl|LJGI|GO010475 weakly similar to UniRef100_A7Q077 Cluster: Ch... 60 1e-08
gnl|LJGI|TC65839 weakly similar to UniRef100_A7Q077 Cluster: Chr... 60 1e-08
>gnl|LJGI|TC59455 weakly similar to UniRef100_A7QF45 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (45%)
Length = 803
Score = 892 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Plus
Query: 1 atggagtctcagtttcttcccaagctctaccttgttctctccttatccatcttcttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggagtctcagtttcttcccaagctctaccttgttctctccttatccatcttcttcctt 140
Query: 61 tcatcttctctcgttcaagctaaagttaccttcaaatactgcgataagaaggcagactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcatcttctctcgttcaagctaaagttaccttcaaatactgcgataagaaggcagactat 200
Query: 121 gctgtcaaggtgactaacattgaaatatcaccaaacccagtagtcagtggcgacccggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgtcaaggtgactaacattgaaatatcaccaaacccagtagtcagtggcgacccggcc 260
Query: 181 acatttaagatctcagctacttctggacaagctattgatggtggagagctggcaattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatttaagatctcagctacttctggacaagctattgatggtggagagctggcaattgga 320
Query: 241 gtatcatatgttggagtgcctgtccatactgaaaaatttgatatttgtgataaagtatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatcatatgttggagtgcctgtccatactgaaaaatttgatatttgtgataaagtatcc 380
Query: 301 tgcccagctaagggcaattttctgattcctcacacccaaacattgcctgcatttactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcccagctaagggcaattttctgattcctcacacccaaacattgcctgcatttactcca 440
Query: 361 ccgggaccctattctctgaagatgacactcgacaatgataagggtgagctcttaacttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccgggaccctattctctgaagatgacactcgacaatgataagggtgagctcttaacttgc 500
Query: 421 atcaagtttaatttcaaaatcgttctcggc 450
||||||||||||||||||||||||||||||
Sbjct: 501 atcaagtttaatttcaaaatcgttctcggc 530
>gnl|LJGI|BW599378
Length = 383
Score = 452 bits (228), Expect = e-127
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 47 ccatcttcttcctttcatcttctctcgttcaagctaaagttaccttcaaatactgcgata 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ccatcttcttcctttcatcttctctcgttcaagctaaagttaccttcaaatactgcgata 211
Query: 107 agaaggcagactatgctgtcaaggtgactaacattgaaatatcaccaaacccagtagtca 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 agaaggcagactatgctgtcaaggtgactaacattgaaatatcaccaaacccagtagtca 271
Query: 167 gtggcgacccggccacatttaagatctcagctacttctggacaagctattgatggtggag 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gtggcgacccggccacatttaagatctcagctacttctggacaagctattgatggtggag 331
Query: 227 agctggcaattggagtatcatatgttggagtgcctgtccatactgaaaaatt 278
|||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 332 agctggcaattggagtatcataggttggagtgcctgtccatactgaaaaatt 383
>gnl|LJGI|TC76893
Length = 529
Score = 137 bits (69), Expect = 7e-32
Identities = 85/89 (95%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 363 gggaccctattct-ctgaagatgacactcgacaatgataagggtgagctcttaacttgca 421
||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 220 gggaccctattcttctgtagatgacactcgaccatgataagggtgagctcttaacttgca 279
Query: 422 tcaagtttaatttcaaaatcgttctcggc 450
|| ||||||||||||||||||||||||||
Sbjct: 280 tccagtttaatttcaaaatcgttctcggc 308
>gnl|LJGI|TC65206 weakly similar to UniRef100_A7Q077 Cluster: Chromosome chr8
scaffold_41, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_41, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (69%)
Length = 652
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 91 ttcaaatactgcgataagaaggcagactatgctgtcaaggtga 133
||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 110 ttcaaatactgtgataagaatgcagactatgctgtgaaggtga 152
>gnl|LJGI|GO010475 weakly similar to UniRef100_A7Q077 Cluster: Chromosome chr8
scaffold_41, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_41, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 583
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 92 tcaaatactgcgataagaaggcagactatgctgtcaaggtga 133
|||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 133 tcaaatactgtgataagaatgcagactatgctgtgaaggtga 174
>gnl|LJGI|TC65839 weakly similar to UniRef100_A7Q077 Cluster: Chromosome chr8
scaffold_41, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_41, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (66%)
Length = 816
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 92 tcaaatactgcgataagaaggcagactatgctgtcaaggtga 133
|||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 133 tcaaatactgtgataagaatgcagactatgctgtgaaggtga 174