Miyakogusa Predicted Gene
- Lj3g3v2927350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2927350.1 tr|B9PDN9|B9PDN9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_795522
PE=4,44.63,7e-18,seg,NULL; coiled-coil,NULL,CUFF.45013.1
(846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69675 weakly similar to UniRef100_A7PGA5 Cluster: Chr... 1677 0.0
gnl|LJGI|GO019536 similar to UniRef100_A7PGA5 Cluster: Chromosom... 1051 0.0
gnl|LJGI|BW629417 507 e-143
gnl|LJGI|TC81434 weakly similar to UniRef100_A7PGA5 Cluster: Chr... 482 e-135
>gnl|LJGI|TC69675 weakly similar to UniRef100_A7PGA5 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (90%)
Length = 1382
Score = 1677 bits (846), Expect = 0.0
Identities = 846/846 (100%)
Strand = Plus / Plus
Query: 1 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 280
Query: 61 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 340
Query: 121 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 400
Query: 181 tgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 460
Query: 241 caagggggtgatgcttcaaggtcatattatcaagggcagaggccagatcccaagttgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 caagggggtgatgcttcaaggtcatattatcaagggcagaggccagatcccaagttgaac 520
Query: 301 ttacagaaccggagcaacagtgaatccagatctcaggctcatgaagaagatatggatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttacagaaccggagcaacagtgaatccagatctcaggctcatgaagaagatatggatgtt 580
Query: 361 ggatatgagggagctcatttatcacaaacttttgaaggtcttgagaagaattttcacgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggatatgagggagctcatttatcacaaacttttgaaggtcttgagaagaattttcacgat 640
Query: 421 gacattatgaaactaaccaaagaacaggatgatgctgaagatgcagaacatgccagacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gacattatgaaactaaccaaagaacaggatgatgctgaagatgcagaacatgccagacac 700
Query: 481 agagagaaaataaatgcaatcaatactcagtatgaagaaaaactggcggcactccgagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 agagagaaaataaatgcaatcaatactcagtatgaagaaaaactggcggcactccgagct 760
Query: 541 cggcatagcaatcgtagagctgactttcttcaaagggaatcaaatgtaagacaacagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cggcatagcaatcgtagagctgactttcttcaaagggaatcaaatgtaagacaacagcag 820
Query: 601 tatgagcaaatcattagagatccttaccccagcagtggcatgccacccagagaacctcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tatgagcaaatcattagagatccttaccccagcagtggcatgccacccagagaacctcat 880
Query: 661 ggttacagcaatgtcgatgtttcgcctgcgggtggagaagtgcaacgaggctattctgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggttacagcaatgtcgatgtttcgcctgcgggtggagaagtgcaacgaggctattctgct 940
Query: 721 gatcactttgatccttaccgagagcgagctcgatttcttgcaagtggaagagaccaagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gatcactttgatccttaccgagagcgagctcgatttcttgcaagtggaagagaccaagga 1000
Query: 781 tttgaaactagaggtccttatcctggaggccgtgtctatgacactggctcacgctactac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tttgaaactagaggtccttatcctggaggccgtgtctatgacactggctcacgctactac 1060
Query: 841 aattga 846
||||||
Sbjct: 1061 aattga 1066
>gnl|LJGI|GO019536 similar to UniRef100_A7PGA5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 687
Score = 1051 bits (530), Expect = 0.0
Identities = 536/538 (99%)
Strand = Plus / Plus
Query: 237 aggtcaagggggtgatgcttcaaggtcatattatcaagggcagaggccagatcccaagtt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aggtcaagggggtgatgcttcaaggtcatattatcaagggcagaggccagatcccaagtt 209
Query: 297 gaacttacagaaccggagcaacagtgaatccagatctcaggctcatgaagaagatatgga 356
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaacttacagaaccggagtaacagtgaatccagatctcaggctcatgaagaagatatgga 269
Query: 357 tgttggatatgagggagctcatttatcacaaacttttgaaggtcttgagaagaattttca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgttggatatgagggagctcatttatcacaaacttttgaaggtcttgagaagaattttca 329
Query: 417 cgatgacattatgaaactaaccaaagaacaggatgatgctgaagatgcagaacatgccag 476
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cgatgacattatgaaactagccaaagaacaggatgatgctgaagatgcagaacatgccag 389
Query: 477 acacagagagaaaataaatgcaatcaatactcagtatgaagaaaaactggcggcactccg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acacagagagaaaataaatgcaatcaatactcagtatgaagaaaaactggcggcactccg 449
Query: 537 agctcggcatagcaatcgtagagctgactttcttcaaagggaatcaaatgtaagacaaca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agctcggcatagcaatcgtagagctgactttcttcaaagggaatcaaatgtaagacaaca 509
Query: 597 gcagtatgagcaaatcattagagatccttaccccagcagtggcatgccacccagagaacc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gcagtatgagcaaatcattagagatccttaccccagcagtggcatgccacccagagaacc 569
Query: 657 tcatggttacagcaatgtcgatgtttcgcctgcgggtggagaagtgcaacgaggctattc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcatggttacagcaatgtcgatgtttcgcctgcgggtggagaagtgcaacgaggctattc 629
Query: 717 tgctgatcactttgatccttaccgagagcgagctcgatttcttgcaagtggaagagac 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgctgatcactttgatccttaccgagagcgagctcgatttcttgcaagtggaagagac 687
>gnl|LJGI|BW629417
Length = 519
Score = 507 bits (256), Expect = e-143
Identities = 259/260 (99%)
Strand = Plus / Plus
Query: 1 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 319
Query: 61 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 379
Query: 121 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 439
Query: 181 tgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 499
Query: 241 caagggggtgatgcttcaag 260
||||||||||||||||||||
Sbjct: 500 caagggggtgatgcttcaag 519
>gnl|LJGI|TC81434 weakly similar to UniRef100_A7PGA5 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 526
Score = 482 bits (243), Expect = e-135
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atgagacggcaggggcagtatggtgatccgtctgcaaatacttatgctgcttcgcagatg 343
Query: 61 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 catcatatggccggtcaaagggccgaaaccaagtccggtagttttgaagggcggttagag 403
Query: 121 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcctttactccggagagagagaacccgtacgcaaattccaaaccggagggtcagtggaga 463
Query: 181 tgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgggaagtggatgaatcgaagatgtctaattcaatgacgtctcgcgtgtataatgaaggt 523
Query: 241 caa 243
|||
Sbjct: 524 caa 526