Miyakogusa Predicted Gene

Lj3g3v2923210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2923210.1 Non Chatacterized Hit- tr|I1M451|I1M451_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,68.64,0,Ring
finger,Zinc finger, RING-type; no description,Zinc finger,
RING/FYVE/PHD-type; RING/U-box,NULL;,CUFF.44997.1
         (660 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome...   589   e-168

>gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 729

 Score =  589 bits (297), Expect = e-168
 Identities = 404/437 (92%), Gaps = 2/437 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgttattggttaaacacaaaattttgaagaacataatgctaaggcgcactaaaataggca 61
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 294 tgttattgcttaaacacaaagttttgaagaacatagtgctaaggcgcactaaaataggca 353

                                                                       
Query: 62  gggctgctgatcttgcgtttccagaaaaaattatttcagtgagaagagtctacctggacg 121
           ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 354 gggttgctgatcttgcgtttccacaaaaaattatttcattgagaagagtctacctggacg 413

                                                                       
Query: 122 taaaggagcaagactattacaagtcaacatgtattgaatgtctgaaatcggt-taataca 180
           ||| |||||||||||||||| ||||||||| ||||||||||| |||| |||| ||||| |
Sbjct: 414 taagggagcaagactattacgagtcaacatctattgaatgtcagaaa-cggtgtaatata 472

                                                                       
Query: 181 tatgttgaagcaaatattgtgatgaatcattatgctgatatatttggtctcctcacgaag 240
           | |  || |   ||| ||| | |||||||| ||||||||| |||||||||||||||| ||
Sbjct: 473 tttaatgcatgcaattttgcggtgaatcatcatgctgataaatttggtctcctcacggag 532

                                                                       
Query: 241 ctgcgtcaggctgttgatcacccataccttgtggtatattctaaacctgaagcgttaaaa 300
           |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||
Sbjct: 533 ctgcgtcaggctgttgatcaccgataccttgtggtaaattctaaacctgcagcgttagaa 592

                                                                       
Query: 301 gggggaggtgtggcagcaagtgatggtactgttgaacaagtatgtggcatttgtgatgag 360
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gggggaggtgtggcagaaaatgatggtactgttgaacaagtatgtggcatttgtgatgag 652

                                                                       
Query: 361 ccagtggaagaccctgtagttacctcttgtgagcatgtattttgtaatgcatgcctagta 420
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ccagaggaagaccctgtagttacctcttgtgagcatgtattttgtaatgcatgcctagta 712

                            
Query: 421 gacttctctgcttccat 437
           |||||||||||||||||
Sbjct: 713 gacttctctgcttccat 729