Miyakogusa Predicted Gene

Lj3g3v2923190.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2923190.2 tr|B9H6V6|B9H6V6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_559008 PE=4
SV=1,49.62,2e-17,SUBFAMILY NOT NAMED,NULL; PEPTIDYL-PROLYL CIS-TRANS
ISOMERASE,Peptidyl-prolyl cis-trans isomerase, F,CUFF.45010.2
         (1680 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV412650 weakly similar to UniRef100_A7PG97 Cluster: Ch...   698   0.0  
gnl|LJGI|TC82335 similar to UniRef100_A7PG97 Cluster: Chromosome...   674   0.0  

>gnl|LJGI|AV412650 weakly similar to UniRef100_A7PG97 Cluster: Chromosome chr6
            scaffold_15, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 355

 Score =  698 bits (352), Expect = 0.0
 Identities = 352/352 (100%)
 Strand = Plus / Plus

                                                                        
Query: 880  gatgcattgaaaaaagatccagaagcaatcagatcattccaaaacttcatttcaagtgcc 939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4    gatgcattgaaaaaagatccagaagcaatcagatcattccaaaacttcatttcaagtgcc 63

                                                                        
Query: 940  gatccttccactctggcttctttgaacatgggacaatccaataatgtgtctccagatatg 999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   gatccttccactctggcttctttgaacatgggacaatccaataatgtgtctccagatatg 123

                                                                        
Query: 1000 attaaagcttcctcagatatgattagcaagatgtcacctgaggaacttcaaaaaatgctt 1059
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124  attaaagcttcctcagatatgattagcaagatgtcacctgaggaacttcaaaaaatgctt 183

                                                                        
Query: 1060 gacatggcgtcttcgtttcaaggggacaacccatttttcagaggaggttccactgattct 1119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184  gacatggcgtcttcgtttcaaggggacaacccatttttcagaggaggttccactgattct 243

                                                                        
Query: 1120 cctttgaaccctggatctattcctcccaatgtgacgcctgacatgtttaaaacagcgagt 1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244  cctttgaaccctggatctattcctcccaatgtgacgcctgacatgtttaaaacagcgagt 303

                                                                
Query: 1180 gacatgataagtaaaatgccagcagatgaccttaagaagatgtttgaaatgg 1231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304  gacatgataagtaaaatgccagcagatgaccttaagaagatgtttgaaatgg 355


>gnl|LJGI|TC82335 similar to UniRef100_A7PG97 Cluster: Chromosome chr6 scaffold_15,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_15, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 840

 Score =  674 bits (340), Expect = 0.0
 Identities = 343/344 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1277 tagacaggaatgaaagaaatgtttcccagtcaaacttcccatcctcaagtagtaacggaa 1336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tagacaggaatgaaagaaatgtttcccagtcaaacttcccatcctcaagtagtaacggaa 60

                                                                        
Query: 1337 ctcatgcttttggagaatcaagttcttctcaaaatttgttttcaaatatgagaaatgctt 1396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctcatgcttttggagaatcaagttcttctcaaaatttgttttcaaatatgagaaatgctt 120

                                                                        
Query: 1397 ctccgccaaatttcccttcctcaagtgctgatttacaagaacagatgagaaaccagatga 1456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ctccgccaaatttcccttcctcaagtgctgatttacaagaacagatgagaaaccagatga 180

                                                                        
Query: 1457 aagatccagctatgcggcagatgttcacatcaatgattaaaaatatgagcccggaaatga 1516
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181  aagatccagctatgcggcagatgttcacatcaatgattaaaaatatgagcccggaaatta 240

                                                                        
Query: 1517 tggcaaacatgggagaacaatttggtgtcaagctctcacctgaagaggcagcaaaagctc 1576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tggcaaacatgggagaacaatttggtgtcaagctctcacctgaagaggcagcaaaagctc 300

                                                        
Query: 1577 agcaaaccatgtcgtccttctcaccagaaagcttggataaaatg 1620
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agcaaaccatgtcgtccttctcaccagaaagcttggataaaatg 344