Miyakogusa Predicted Gene

Lj3g3v2921120.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2921120.1 Non Chatacterized Hit- tr|I1KFG0|I1KFG0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,70.51,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Cellulose_synt,Cellulose synthase,CUFF.44989.1
         (1362 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81804 weakly similar to UniRef100_Q2HT17 Cluster: Cel...   406   e-112

>gnl|LJGI|TC81804 weakly similar to UniRef100_Q2HT17 Cluster: Cellulose synthase; n=1;
            Medicago truncatula|Rep: Cellulose synthase - Medicago
            truncatula (Barrel medic), partial (16%)
          Length = 482

 Score =  406 bits (205), Expect = e-112
 Identities = 361/414 (87%), Gaps = 6/414 (1%)
 Strand = Plus / Plus

                                                                        
Query: 944  gtttttgtggatttctgagtgtcctacttaagttgttgggaatatcagatactgtttttg 1003
            |||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||
Sbjct: 1    gtttttgtggatttctgagtgtcctacttaagttgttgggtatatctgatacaatttttg 60

                                                                        
Query: 1004 agataacaaagaaagatgtaccctcttcaagtgatgttaaggatgacaaggatgctagta 1063
            ||||||||||||||||    |||| ||||| ||||||||| ||||| | ||||||| |||
Sbjct: 61   agataacaaagaaagacaagccctattcaaatgatgttaatgatgatagggatgctggta 120

                                                                        
Query: 1064 ggtttaccttcgatgagtccctagnnnnnnngccaggaactaccatcttgttgttgcaac 1123
            |||||||||| |||||||||||||       ||| |||||||||||||||||| ||||||
Sbjct: 121  ggtttacctttgatgagtccctagtttttttgccgggaactaccatcttgttgctgcaac 180

                                                                        
Query: 1124 taacagcaatgactttcaagtttttaggattgca---atcatcaccaccaagtcaagatg 1180
            |||||||||||||||||||| |||| ||||||||   ||||||| |||| |||| |  ||
Sbjct: 181  taacagcaatgactttcaagcttttgggattgcaaccatcatcaacacccagtccaagtg 240

                                                                        
Query: 1181 gg---aaggaatgtggtttgggagagatgttgtgttgtgcatatttgataatatgctatt 1237
            ||   || | |||||| ||||||||| |||| ||||||||||||||||||||||||| ||
Sbjct: 241  ggaaaaatggatgtggattgggagagttgttctgttgtgcatatttgataatatgctttt 300

                                                                        
Query: 1238 ggccatttctgagaggactatttgagacaggaaaatataggattcctttttccacagtat 1297
            |||||||||||||||| ||||||||||||||||| |||||||||||    ||||| ||||
Sbjct: 301  ggccatttctgagagggctatttgagacaggaaagtataggattccccgatccactgtat 360

                                                                  
Query: 1298 gcaaagcagcaaccataacatttatctttgtacacctttctagaaagacaacta 1351
            ||||||||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct: 361  gcaaagcagcaacaataacatttatctttgtacacctttctagaagggcaacta 414