Miyakogusa Predicted Gene
- Lj3g3v2920950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2920950.1 tr|G7JEQ3|G7JEQ3_MEDTR Inner membrane transport
protein OS=Medicago truncatula GN=MTR_4g049640 PE=4
,72.75,0,C4dic_mal_tran,C4-dicarboxylate transporter/malic acid
transport protein; seg,NULL; SUBFAMILY NOT NA,CUFF.44970.1
(1161 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71592 similar to UniRef100_A7PX45 Cluster: Chromosome... 2302 0.0
gnl|LJGI|TC80384 similar to UniRef100_A7QUJ0 Cluster: Chromosome... 581 e-165
gnl|LJGI|TC78350 weakly similar to UniRef100_A7QUJ0 Cluster: Chr... 52 8e-06
>gnl|LJGI|TC71592 similar to UniRef100_A7PX45 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1403
Score = 2302 bits (1161), Expect = 0.0
Identities = 1161/1161 (100%)
Strand = Plus / Plus
Query: 1 atggttgaaatgagcaactctgagaaacaaccacaaactcatatagcattaccaatagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggttgaaatgagcaactctgagaaacaaccacaaactcatatagcattaccaatagtt 96
Query: 61 atagacattccagtcaccaaaactcaatcccataatcacaacaagtctcaaatccatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atagacattccagtcaccaaaactcaatcccataatcacaacaagtctcaaatccatgtc 156
Query: 121 caatcttcttcaattctatcacaaatccatgcagggtatttcagaatcagcttagccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 caatcttcttcaattctatcacaaatccatgcagggtatttcagaatcagcttagccctc 216
Query: 181 tcaagtcaagccttgttgtggaaggtcctcattgaaccaatcgaagacgcacacgctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tcaagtcaagccttgttgtggaaggtcctcattgaaccaatcgaagacgcacacgctctt 276
Query: 241 agaaaaatattttcattcataccctccactgctttcactttcctatggtatctagccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agaaaaatattttcattcataccctccactgctttcactttcctatggtatctagccttg 336
Query: 301 ttcacactagtcacactctcttttctctatgttctaagatgtgtgtttcactttgacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttcacactagtcacactctcttttctctatgttctaagatgtgtgtttcactttgacatg 396
Query: 361 gtgaaagatgagttcttaagccatgtgggagtgaactacctctttgctccatggatttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtgaaagatgagttcttaagccatgtgggagtgaactacctctttgctccatggatttca 456
Query: 421 tgtctacttttgctagagtcatcaccatttgttccctctaattcacttagccacagagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtctacttttgctagagtcatcaccatttgttccctctaattcacttagccacagagtt 516
Query: 481 ctttggtgtgtgtttgtgactcctgtggtggtgcttgatgtgaagatctatggccagtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctttggtgtgtgtttgtgactcctgtggtggtgcttgatgtgaagatctatggccagtgg 576
Query: 541 ttcacaaaggggaagaggtttctgtcggcggtcgcgaacccaacaagccaattgtctgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttcacaaaggggaagaggtttctgtcggcggtcgcgaacccaacaagccaattgtctgtg 636
Query: 601 attggaaacttggtaggggctcgggtggctgcggagatgggttggaaagagagtgcaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 attggaaacttggtaggggctcgggtggctgcggagatgggttggaaagagagtgcaatt 696
Query: 661 tgcttgttttctcttgggatttcgcattacttggtgctttttgtgactctgtatcagagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tgcttgttttctcttgggatttcgcattacttggtgctttttgtgactctgtatcagagg 756
Query: 721 ttgccagggaatgataatagcctccctcctctgctgcgtcctgtgttcttcttgttcttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttgccagggaatgataatagcctccctcctctgctgcgtcctgtgttcttcttgttcttt 816
Query: 781 gcggcgccaagcgtagccagcttggcttggcgctccattagtgacgagttcgataccgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gcggcgccaagcgtagccagcttggcttggcgctccattagtgacgagttcgataccgct 876
Query: 841 tcgaagatgctgttctttctctccttcttccttttcatgtctctggtttcaaggcctctg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 tcgaagatgctgttctttctctccttcttccttttcatgtctctggtttcaaggcctctg 936
Query: 901 ctatttaagaagtccatgaagaaattcaatgtggcatggtgggcttattcttttcctctg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 ctatttaagaagtccatgaagaaattcaatgtggcatggtgggcttattcttttcctctg 996
Query: 961 acggctttggcgcttgcttcagcagaatatgcacatcaagttaagggactcactgctcat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 acggctttggcgcttgcttcagcagaatatgcacatcaagttaagggactcactgctcat 1056
Query: 1021 gctgttatgttggtcttatcattgatctcagttttggtgtctgtggttttaatgattgtc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gctgttatgttggtcttatcattgatctcagttttggtgtctgtggttttaatgattgtc 1116
Query: 1081 actgctctcaacactagcatacccttaccagctaacaaccttgactcagatcagaaaagc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 actgctctcaacactagcatacccttaccagctaacaaccttgactcagatcagaaaagc 1176
Query: 1141 aattgcacagcaacgtgatta 1161
|||||||||||||||||||||
Sbjct: 1177 aattgcacagcaacgtgatta 1197
>gnl|LJGI|TC80384 similar to UniRef100_A7QUJ0 Cluster: Chromosome chr10 scaffold_179,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 924
Score = 581 bits (293), Expect = e-165
Identities = 448/501 (89%), Gaps = 24/501 (4%)
Strand = Plus / Plus
Query: 685 cattacttggtgctttttgtgactctgtatcagaggttgccagggaatgataatagcctc 744
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 333 cattacttggtgctttttgtgactctgtatcagaggttaccagggtatgataatagcctc 392
Query: 745 cctcctctgctgcgtcctgtgttcttcttgttctttgcggcgccaagcgtagccagcttg 804
||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 393 cctcctctgctgcgtcccgtgttcttcttgttctttgcggggccaagcgtagcgagcttg 452
Query: 805 gcttggcgctccattagtgacgagttcgataccgcttcgaagatgctgttctt-----tc 859
|||||||||||||| ||| |||||| ||||||||||| |||||||||||||| ||
Sbjct: 453 gcttggcgctccatctgtggcgagtttgataccgcttccaagatgctgttcttcttcctc 512
Query: 860 tctccttcttcctttt----catgtctctggtttcaaggcctctgctatttaagaagtcc 915
| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||
Sbjct: 513 tttccttcttcctttctttccatgcccctggtttcaaggcctctgctatttaagaagtcc 572
Query: 916 atgaagaaattcaatgtggcatggtgggcttattcttttcctctgacggctttggcgctt 975
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 573 atgaagaaattcaatgtggcatggtgggcttattcttttcctctgacggctttggcactt 632
Query: 976 gcttcagcagaatatgcacatcaagttaaggga---ctcactgctcatgctgttatgttg 1032
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 633 gcttcagcagagtatgcacatcaagttaagggaatgatcactgctcatgctgttatgttg 692
Query: 1033 gtcttatcattg------------atctcagttttggtgtctgtggttttaatgattgtc 1080
|||||||| ||| ||||||||| ||||||||||||| || |||||||||
Sbjct: 693 gtcttatctttggtcttatctttaatctcagttgtggtgtctgtggtattgatgattgtc 752
Query: 1081 actgctctcaacactagcatacccttaccagctaacaaccttgactcagatcagaaaagc 1140
|||||| | ||||||||||| ||||||||||||||||| | |||||| || ||||||||
Sbjct: 753 actgctttgaacactagcatgtccttaccagctaacaacttcgactcaaattagaaaagc 812
Query: 1141 aattgcacagcaacgtgatta 1161
|||||||||||||||||||||
Sbjct: 813 aattgcacagcaacgtgatta 833
Score = 456 bits (230), Expect = e-127
Identities = 289/309 (93%), Gaps = 6/309 (1%)
Strand = Plus / Plus
Query: 1 atggttgaaatgagcaactctgagaaacaaccacaaactcatatagcattaccaatagtt 60
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 23 atggttgaaatgagcaactctgagaaacaaccacaacctcatatagcatttccaatagtt 82
Query: 61 atagacattccagtcaccaaaactcaatcccataatcacaacaagtctcaaatccatgtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttagacattccagtcaccaaaactcaatcccataatcacaacaagtctcaaatccatgtc 142
Query: 121 caatcttctt------caattctatcacaaatccatgcagggtatttcagaatcagctta 174
|||| |||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 143 caatattctctatctccaattctaccacaaatccatgcagggtatttcagaatcagctta 202
Query: 175 gccctctcaagtcaagccttgttgtggaaggtcctcattgaaccaatcgaagacgcacac 234
||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||| |
Sbjct: 203 tccctctcaagtcaagccttgttgtggaagatcctcattgaacaaatcaaagatgcactc 262
Query: 235 gctcttagaaaaatattttcattcataccctccactgctttcactttcctatggtatcta 294
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 263 gctcttagaaaaatattttcatccataccctccactgctttcactctcctatggtatcta 322
Query: 295 gccttgttc 303
|||||||||
Sbjct: 323 gccttgttc 331
>gnl|LJGI|TC78350 weakly similar to UniRef100_A7QUJ0 Cluster: Chromosome chr10
scaffold_179, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_179, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (70%)
Length = 1196
Score = 52.0 bits (26), Expect = 8e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 846 gatgctgttctttctctccttcttccttttcatgtctc 883
||||||||||||||| || || ||||||||||||||||
Sbjct: 807 gatgctgttctttctgtcattgttccttttcatgtctc 844