Miyakogusa Predicted Gene
- Lj3g3v2920830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2920830.1 Non Chatacterized Hit- tr|I1PHD3|I1PHD3_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,47.06,4e-17,Bap31,B-cell receptor-associated 31-like;
coiled-coil,NULL; BCR-ASSOCIATED PROTEIN, BAP,NULL;
BCR-AS,CUFF.44960.1
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63332 similar to UniRef100_Q9FH68 Cluster: Arabidopsi... 1326 0.0
gnl|LJGI|TC62053 similar to UniRef100_A2Q4H3 Cluster: Prefoldin;... 143 2e-33
gnl|LJGI|TC59081 weakly similar to UniRef100_A7PX43 Cluster: Chr... 143 2e-33
gnl|LJGI|TC67908 similar to UniRef100_A2Q4H3 Cluster: Prefoldin;... 101 5e-21
>gnl|LJGI|TC63332 similar to UniRef100_Q9FH68 Cluster: Arabidopsis thaliana genomic
DNA, chromosome 5, TAC clone:K16E1; n=1; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K16E1 - Arabidopsis thaliana
(Mouse-ear cress), partial (79%)
Length = 992
Score = 1326 bits (669), Expect = 0.0
Identities = 669/669 (100%)
Strand = Plus / Plus
Query: 1 atgttgcagctactctacactgcgattttcagcgaaatgcttctgattctgaccctcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgttgcagctactctacactgcgattttcagcgaaatgcttctgattctgaccctcgtt 171
Query: 61 ttcaaaaccccactcaggaagcttgtcatcgtttccttggatcgtgtcaagcgaggtcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ttcaaaaccccactcaggaagcttgtcatcgtttccttggatcgtgtcaagcgaggtcgt 231
Query: 121 ggccctatcgtcgtcaccactgtgggtgtcacgttgattatcgtgcttgcttccagtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggccctatcgtcgtcaccactgtgggtgtcacgttgattatcgtgcttgcttccagtctc 291
Query: 181 tatagcatggcgaagatccaagaacgtaccatcgaggccggtgtactcaaccccaccgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tatagcatggcgaagatccaagaacgtaccatcgaggccggtgtactcaaccccaccgat 351
Query: 241 caagtcctcttttccaagcacttgctcgaagcctctctaatgggttttgtgctgttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 caagtcctcttttccaagcacttgctcgaagcctctctaatgggttttgtgctgttcctc 411
Query: 301 tctctgatgattgatagattgcaccattacataagagagcttcgcttgctcaggaagacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tctctgatgattgatagattgcaccattacataagagagcttcgcttgctcaggaagacc 471
Query: 361 atggaagctgttaagaaacaaagcaggagttttgatgatgataaaaatggcaatgcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 atggaagctgttaagaaacaaagcaggagttttgatgatgataaaaatggcaatgcagag 531
Query: 421 gagcataaggcattggcagaagaaatcatggcattgaagtctaaagttaagaaactggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gagcataaggcattggcagaagaaatcatggcattgaagtctaaagttaagaaactggaa 591
Query: 481 tctgaatgtgaggtgaaaggtaataaggctaagactttggaaactgaagtagaggctctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tctgaatgtgaggtgaaaggtaataaggctaagactttggaaactgaagtagaggctctt 651
Query: 541 aagaagcagtctgaggggttccttatggaatatgatcgcctcttggaagacaatcagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aagaagcagtctgaggggttccttatggaatatgatcgcctcttggaagacaatcagaat 711
Query: 601 ctccggaatcaattgaacaccattgaccatagcactttgaatcttgataacaaaaagagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctccggaatcaattgaacaccattgaccatagcactttgaatcttgataacaaaaagagc 771
Query: 661 atgtgaagg 669
|||||||||
Sbjct: 772 atgtgaagg 780
>gnl|LJGI|TC62053 similar to UniRef100_A2Q4H3 Cluster: Prefoldin; n=1; Medicago
truncatula|Rep: Prefoldin - Medicago truncatula (Barrel
medic), partial (54%)
Length = 843
Score = 143 bits (72), Expect = 2e-33
Identities = 284/354 (80%), Gaps = 3/354 (0%)
Strand = Plus / Plus
Query: 265 ctcgaagcctctctaatgggttttgtgctgttcctctctctgatgattgatagattgcac 324
|||||||| ||||| | |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 85 ctcgaagcttctcttttaggttttgttctgttcctttctctgatgatagatagattgcac 144
Query: 325 cattacataagagagcttcgcttgctcaggaagaccatggaagctgttaagaaacaaagc 384
|||||||| ||||||||||| ||||| |||| | | |||| ||| ||||||||||||
Sbjct: 145 cattacattagagagcttcggttgctgaggagggctgtggagtctgcgaagaaacaaagc 204
Query: 385 aggagttttgatgatgataaaaatggcaatgcagaggagcataa---ggcattggcagaa 441
| || || | | | | || |||||||| |||| ||||| || ||| ||| |||
Sbjct: 205 cgaagcttcggtaacggtataaatggcattgcaacagagcaaaacaaggccttgatggaa 264
Query: 442 gaaatcatggcattgaagtctaaagttaagaaactggaatctgaatgtgaggtgaaaggt 501
||||| |||||| ||| ||||||||| |||| || ||||||||||||||||||||
Sbjct: 265 gaaattgccacattgaggtccaaagttaaggaacttgagtctgaatgtgaggtgaaagga 324
Query: 502 aataaggctaagactttggaaactgaagtagaggctcttaagaagcagtctgaggggttc 561
| | ||||||| |||||| |||| || ||| |||||||||| || ||||| ||||||
Sbjct: 325 agcagggctaagggcttggaagctgaggttgagactcttaagaaacaatctgaagggttc 384
Query: 562 cttatggaatatgatcgcctcttggaagacaatcagaatctccggaatcaattg 615
||||||||||||||||||||||| | || ||||||||||| | || |||||||
Sbjct: 385 cttatggaatatgatcgcctcttagcggaaaatcagaatcttcagagtcaattg 438
>gnl|LJGI|TC59081 weakly similar to UniRef100_A7PX43 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (89%)
Length = 761
Score = 143 bits (72), Expect = 2e-33
Identities = 284/354 (80%), Gaps = 3/354 (0%)
Strand = Plus / Plus
Query: 265 ctcgaagcctctctaatgggttttgtgctgttcctctctctgatgattgatagattgcac 324
|||||||| ||||| | |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 328 ctcgaagcttctcttttaggttttgttctgttcctttctctgatgatagatagattgcac 387
Query: 325 cattacataagagagcttcgcttgctcaggaagaccatggaagctgttaagaaacaaagc 384
|||||||| ||||||||||| ||||| |||| | | |||| ||| ||||||||||||
Sbjct: 388 cattacattagagagcttcggttgctgaggagggctgtggagtctgcgaagaaacaaagc 447
Query: 385 aggagttttgatgatgataaaaatggcaatgcagaggagcataa---ggcattggcagaa 441
| || || | | | | || |||||||| |||| ||||| || ||| ||| |||
Sbjct: 448 cgaagcttcggtaacggtataaatggcattgcaacagagcaaaacaaggccttgatggaa 507
Query: 442 gaaatcatggcattgaagtctaaagttaagaaactggaatctgaatgtgaggtgaaaggt 501
||||| |||||| ||| ||||||||| |||| || ||||||||||||||||||||
Sbjct: 508 gaaattgccacattgaggtccaaagttaaggaacttgagtctgaatgtgaggtgaaagga 567
Query: 502 aataaggctaagactttggaaactgaagtagaggctcttaagaagcagtctgaggggttc 561
| | ||||||| |||||| |||| || ||| |||||||||| || ||||| ||||||
Sbjct: 568 agcagggctaagggcttggaagctgaggttgagactcttaagaaacaatctgaagggttc 627
Query: 562 cttatggaatatgatcgcctcttggaagacaatcagaatctccggaatcaattg 615
||||||||||||||||||||||| | || ||||||||||| | || |||||||
Sbjct: 628 cttatggaatatgatcgcctcttagcggaaaatcagaatcttcagagtcaattg 681
>gnl|LJGI|TC67908 similar to UniRef100_A2Q4H3 Cluster: Prefoldin; n=1; Medicago
truncatula|Rep: Prefoldin - Medicago truncatula (Barrel
medic), partial (61%)
Length = 753
Score = 101 bits (51), Expect = 5e-21
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 265 ctcgaagcctctctaatgggttttgtgctgttcctctctctgatgattgatagattgcac 324
|||||||| ||||| | |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 504 ctcgaagcttctcttttaggttttgttctgttcctttctctgatgatagatagattgcac 563
Query: 325 cattacataagagagcttcgcttgctcagga 355
|||||||| ||||||||||| ||||| ||||
Sbjct: 564 cattacattagagagcttcggttgctgagga 594