Miyakogusa Predicted Gene
- Lj3g3v2920810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2920810.1 Non Chatacterized Hit- tr|I1LU44|I1LU44_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13965
PE,71.6,0,ZF_RING_2,Zinc finger, RING-type;
HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain;,CUFF.45008.1
(2706 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81658 similar to UniRef100_A9TCP3 Cluster: Predicted ... 474 e-132
gnl|LJGI|TC75176 homologue to UniRef100_A7PX42 Cluster: Chromoso... 315 8e-85
gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome... 165 2e-39
gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome... 157 4e-37
gnl|LJGI|TC59140 similar to UniRef100_A7PX42 Cluster: Chromosome... 119 1e-25
gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome... 58 3e-07
>gnl|LJGI|TC81658 similar to UniRef100_A9TCP3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(10%)
Length = 427
Score = 474 bits (239), Expect = e-132
Identities = 250/253 (98%), Gaps = 3/253 (1%)
Strand = Plus / Plus
Query: 1 atggagcttcgttcccgtcggcgactctccaccaccgcggcggtttccg---agaaggag 57
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 175 atggagcttcgttcccgtcggcgactctccaccaccgcggcggtttccgcagagaaggag 234
Query: 58 aagcagcaggaggatgagaagcagcctgaggaagttgaaactaatggccagtgcagtact 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagcagcaggaggatgagaagcagcctgaggaagttgaaactaatggccagtgcagtact 294
Query: 118 ggtgctgctgatgacgatgacgaagtttttgatgtaccttccgatcctgaagatgaagac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggtgctgctgatgacgatgacgaagtttttgatgtaccttccgatcctgaagatgaagac 354
Query: 178 tttgaggggatgcttttagtcttgaaggatcaaacttcaagcattagtggttctgatgga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tttgaggggatgcttttagtcttgaaggatcaaacttcaagcattagtggttctgatgga 414
Query: 238 gaagataatgctt 250
|||||||||||||
Sbjct: 415 gaagataatgctt 427
>gnl|LJGI|TC75176 homologue to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 520
Score = 315 bits (159), Expect = 8e-85
Identities = 165/167 (98%)
Strand = Plus / Plus
Query: 2540 aaccaatcagaattgtaagatttgtcattgaaaacactatcgaggagaggatcttgaaac 2599
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aacccatccgaattgtaagatttgtcattgaaaacactatcgaggagaggatcttgaaac 61
Query: 2600 ttcaagagaagaaggaactagtgtttgaagggactgttggtggctcttctgaggctctgg 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcaagagaagaaggaactagtgtttgaagggactgttggtggctcttctgaggctctgg 121
Query: 2660 ggaaattgacggaggccgacttgagatttctctttgtcacctaagct 2706
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggaaattgacggaggccgacttgagatttctctttgtcacctaagct 168
>gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 638
Score = 165 bits (83), Expect = 2e-39
Identities = 191/227 (84%)
Strand = Plus / Plus
Query: 2365 gccattaaaagatttactgatgatccagactgcagaatttttctcatgagcttgaaggca 2424
|||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 1 gccattaaaagatttaatgatgatccagactgcagaatttttctcttgagtttgaaggcg 60
Query: 2425 ggcggtattgctctcaatttgactgtagcatcacatgtcttccttatggacccttggtgg 2484
| ||| |||| ||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 61 gctggtgttgccatcaatttgactgtagcatctcatgttttcctcatggagccttggtgg 120
Query: 2485 aaccctgcggtggaacgtcaagctcaagatagaattcaccggatagggcaatacaaacca 2544
||||| | || || | || ||||| |||||||||||||| ||||||||| | |||||
Sbjct: 121 aacccaggcgtagagcaacaggctcaggatagaattcaccgaatagggcaaaataaacct 180
Query: 2545 atcagaattgtaagatttgtcattgaaaacactatcgaggagaggat 2591
|| ||| |||| | ||| ||| || ||||| ||||||||||||||
Sbjct: 181 ataagagttgtgaagtttatcacagagaacaccatcgaggagaggat 227
>gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome chr10 scaffold_297,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_297, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 666
Score = 157 bits (79), Expect = 4e-37
Identities = 151/175 (86%)
Strand = Plus / Plus
Query: 2361 tgctgccattaaaagatttactgatgatccagactgcagaatttttctcatgagcttgaa 2420
|||||||||||||||||||| ||||||||||||||||| | |||||||| |||| |||||
Sbjct: 7 tgctgccattaaaagatttaatgatgatccagactgcaaattttttctcttgagtttgaa 66
Query: 2421 ggcaggcggtattgctctcaatttgactgtagcatcacatgtcttccttatggacccttg 2480
||||| ||| | || |||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 67 ggcagctggtgtggccctcaatttgactgtagcatcacatgttttcctcatggagccttg 126
Query: 2481 gtggaaccctgcggtggaacgtcaagctcaagatagaattcaccggatagggcaa 2535
||||||||| | | || | || ||||| |||||||||||||| |||||||||
Sbjct: 127 gtggaacccagacgcagagcaacaggctcaggatagaattcaccgaatagggcaa 181
>gnl|LJGI|TC59140 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 808
Score = 119 bits (60), Expect = 1e-25
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 623 ggtatcaaagggaatggttagcatgggctttgaaacaagaaagttctgcgactagaggag 682
|||| |||| ||||||| |||| |||| |||||| || |||| |||| | |||||| |
Sbjct: 312 ggtaccaaaaggaatggctagcgtggggtttgaatcaggaaaattctcctgttagaggtg 371
Query: 683 gaatccttgctgacgaaatgggaatggggaagactattcaagcaattgcccttgtccttg 742
|||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 372 gaattcttgcagatgaaatgggaatggggaagactattcaagcaattgcccttgttcttg 431
Query: 743 ccaaacgt 750
||||||||
Sbjct: 432 ccaaacgt 439
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 969 tgattttgtaataactacatactctattgttgagtctgagt 1009
||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 670 tgattttgttataactacttactctattgttcagtctgagt 710
>gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 729
Score = 58.0 bits (29), Expect = 3e-07
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1598 tattgcttaagaacaagattttgaagagcatagttttaagacgaactaaactaggcaggg 1657
|||||||||| |||| ||||||||| |||||| |||| || |||||| |||||||||
Sbjct: 297 tattgcttaaacacaaagttttgaagaacatagtgctaaggcgcactaaaataggcaggg 356
Query: 1658 ctgctgatcttgc 1670
||||||||||||
Sbjct: 357 ttgctgatcttgc 369