Miyakogusa Predicted Gene

Lj3g3v2910770.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2910770.1 Non Chatacterized Hit- tr|I1LU44|I1LU44_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13965 PE,51.96,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; DEAD-like
helicases superfamily,Helicase,,CUFF.44953.1
         (963 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59140 similar to UniRef100_A7PX42 Cluster: Chromosome...  1183   0.0  
gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome...   228   5e-59

>gnl|LJGI|TC59140 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 808

 Score = 1183 bits (597), Expect = 0.0
 Identities = 597/597 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcgagaagaagatgcttccgccggtgccggtaatggaaaagaagaattaacggtggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgcgagaagaagatgcttccgccggtgccggtaatggaaaagaagaattaacggtggaa 271

                                                                       
Query: 61  accgccgagccttcctctgatctcaccgtacctctgctcaggtaccaaaaggaatggcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 accgccgagccttcctctgatctcaccgtacctctgctcaggtaccaaaaggaatggcta 331

                                                                       
Query: 121 gcgtggggtttgaatcaggaaaattctcctgttagaggtggaattcttgcagatgaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcgtggggtttgaatcaggaaaattctcctgttagaggtggaattcttgcagatgaaatg 391

                                                                       
Query: 181 ggaatggggaagactattcaagcaattgcccttgttcttgccaaacgtcaagacttgcga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggaatggggaagactattcaagcaattgcccttgttcttgccaaacgtcaagacttgcga 451

                                                                       
Query: 241 caaacgggtcgcgaaattgaacacgaatgggtgccttcaacctcaagtccttttgttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaacgggtcgcgaaattgaacacgaatgggtgccttcaacctcaagtccttttgttaca 511

                                                                       
Query: 301 gtgttgcctgcaatcaaaggaacgcttgttgtgtgtcccccggttgctgtctctcattgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtgttgcctgcaatcaaaggaacgcttgttgtgtgtcccccggttgctgtctctcattgg 571

                                                                       
Query: 361 gtcaatgaaattgatcgctttacttccgaagggagcactgaggtgctggtctatcatgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtcaatgaaattgatcgctttacttccgaagggagcactgaggtgctggtctatcatgga 631

                                                                       
Query: 421 attgatttagtgaagccccgggaccagttctcgaagtttgattttgttataactacttac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 attgatttagtgaagccccgggaccagttctcgaagtttgattttgttataactacttac 691

                                                                       
Query: 481 tctattgttcagtctgagtgcaagacggccatgagtgaatgtctctattgtggaaaggtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tctattgttcagtctgagtgcaagacggccatgagtgaatgtctctattgtggaaaggtg 751

                                                                    
Query: 541 tttttggagcctaattctcgtcaagaccatgtttgtaggcctgatgttagagctgaa 597
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tttttggagcctaattctcgtcaagaccatgtttgtaggcctgatgttagagctgaa 808


>gnl|LJGI|TC60174 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 729

 Score =  228 bits (115), Expect = 5e-59
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                       
Query: 849 aaatgaaaaatgttcgaaatgcagccatggtacttcaaggcatttctcttggtggattaa 908
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaatgaaaaatgttcgaaatgcagccatggtacttcaaggcatttctcttggtggattaa 254

                                                                  
Query: 909 atacattgtccataaaattgaaagtgatgagaaaataactgttattgcttaaaca 963
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atacattgtccataaaattgaaagtgatgagaaaataactgttattgcttaaaca 309