Miyakogusa Predicted Gene
- Lj3g3v2908390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2908390.1 Non Chatacterized Hit- tr|I1KFD3|I1KFD3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,74.07,0,DNA_pol_A_exo1,3'-5' exonuclease domain;
HRDC,Helicase/RNase D C-terminal, HRDC domain; seg,NULL;
no,CUFF.45036.1
(2736 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59925 similar to UniRef100_A7PX27 Cluster: Chromosome... 1491 0.0
gnl|LJGI|TC59839 similar to UniRef100_A7PX27 Cluster: Chromosome... 1035 0.0
>gnl|LJGI|TC59925 similar to UniRef100_A7PX27 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 774
Score = 1491 bits (752), Expect = 0.0
Identities = 755/756 (99%)
Strand = Plus / Plus
Query: 1 atgaacaccggaaacaaaacgcgcgtggcggcggcattcacgatcgctgctttagcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atgaacaccggaaacaaaacgcgcgtggcggcggcattcacgatcgctgctttagcagct 78
Query: 61 accatcatctccatcttcttcaccgcacgacgacgccgtaaccaccggcacgagtcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 accatcatctccatcttcttcaccgcacgacgacgccgtaaccaccggcacgagtcccct 138
Query: 121 ccgagctcgtgctactcacattccgaacggaagccaaagtgcgcgttcaagcgtgtcttg 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 139 ccgagctcgtgctactcacattccgaacggaagccacagtgcgcgttcaagcgtgtcttg 198
Query: 181 gcagataactcctacgctccattcaaacacttgagcctcaacgatgagaatggttcggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gcagataactcctacgctccattcaaacacttgagcctcaacgatgagaatggttcggat 258
Query: 241 ttgcatccgtttgaggcagagattacggcattggtaagaagtcctcagccggaaattgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgcatccgtttgaggcagagattacggcattggtaagaagtcctcagccggaaattgaa 318
Query: 301 cttagtgatgattttgaggttgtggacttggagacgaatgattcgtatgtttgggtcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttagtgatgattttgaggttgtggacttggagacgaatgattcgtatgtttgggtcgat 378
Query: 361 acagaggtactgttaaaggaactggtcaatgaattgagcaaggagaagttctttgccgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acagaggtactgttaaaggaactggtcaatgaattgagcaaggagaagttctttgccgtg 438
Query: 421 gacacagaacaacatagcttacactcttttttaggctttacagcattagttcagatttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacacagaacaacatagcttacactcttttttaggctttacagcattagttcagatttct 498
Query: 481 acacagaagaaagattatttggttgacacaattgctctgcatgattctatgggaatcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acacagaagaaagattatttggttgacacaattgctctgcatgattctatgggaatcctt 558
Query: 541 cgcccagtttttgctaatccttccatttgtaaagtgttccatggagctgacaatgatatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cgcccagtttttgctaatccttccatttgtaaagtgttccatggagctgacaatgatatt 618
Query: 601 ctctggctacagagggacttccatatttatgttgttaatctttttgatacttctaaggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctctggctacagagggacttccatatttatgttgttaatctttttgatacttctaaggca 678
Query: 661 tgtgaagtgctttcaaaaccacagaaatcacttgcttatttgctagaaacttactgtggc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgtgaagtgctttcaaaaccacagaaatcacttgcttatttgctagaaacttactgtggc 738
Query: 721 gtggtgacaaataaattattacagcgtgaagactgg 756
||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtggtgacaaataaattattacagcgtgaagactgg 774
>gnl|LJGI|TC59839 similar to UniRef100_A7PX27 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 787
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 2215 gcagtgccacaactggagaatcatgttggttgcgctccgggtgatgaggacgcattgaat 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagtgccacaactggagaatcatgttggttgcgctccgggtgatgaggacgcattgaat 60
Query: 2275 gatgatgctcatgatggagaacttttgatggaaaaagatgatctagggaaccccttatta 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgatgctcatgatggagaacttttgatggaaaaagatgatctagggaaccccttatta 120
Query: 2335 gcttctgaccttgcagttgatgcagctatttcaaatggagattataatgaaggtgggaac 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttctgaccttgcagttgatgcagctatttcaaatggagattataatgaaggtgggaac 180
Query: 2395 tctttaaatgttgataacagtctgagcagaacgctaccaaatggagttagcgacttgttt 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctttaaatgttgataacagtctgagcagaacgctaccaaatggagttagcgacttgttt 240
Query: 2455 gatccctccaaatatgaagaatcaacactagcgaagcataattcgaaactatcactcttg 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatccctccaaatatgaagaatcaacactagcgaagcataattcgaaactatcactcttg 300
Query: 2515 ggacatggaccacacgggaatttagttgtagaacatttactgaaggagtttggtgaagag 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacatggaccacacgggaatttagttgtagaacatttactgaaggagtttggtgaagag 360
Query: 2575 ggtattggagagttttgtcaaagatggagacaagtatttgtggatgctgtaaatccacga 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtattggagagttttgtcaaagatggagacaagtatttgtggatgctgtaaatccacga 420
Query: 2635 tttcttcctggtggttgggatgtgaaacacagtggacgaagggagttcggcaagttcagt 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttcttcctggtggttgggatgtgaaacacagtggacgaagggagttcggcaagttcagt 480
Query: 2695 gtatacaatactgacaaaagagtggatgctgttagtatgtag 2736
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtatacaatactgacaaaagagtggatgctgttagtatgtag 522