Miyakogusa Predicted Gene

Lj3g3v2907350.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2907350.1 Non Chatacterized Hit- tr|K4ACD8|K4ACD8_SETIT
Uncharacterized protein OS=Setaria italica GN=Si036545,48.28,0.000004,
,85188_g.1
         (211 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67804 similar to UniRef100_A7PX34 Cluster: Chromosome...   418   e-117

>gnl|LJGI|TC67804 similar to UniRef100_A7PX34 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 959

 Score =  418 bits (211), Expect = e-117
 Identities = 211/211 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttcgaccgcgcaacttctgcaccaacagcaataatggctacaggacctgaaacctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atgttcgaccgcgcaacttctgcaccaacagcaataatggctacaggacctgaaacctta 295

                                                                       
Query: 61  ctagctgactgtgagaagtttaaaaatgtctgccttaagccatctaaaacattagatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctagctgactgtgagaagtttaaaaatgtctgccttaagccatctaaaacattagatgat 235

                                                                       
Query: 121 aaaccccagaattctttcgcggtaaagctaaaagcgtccaccacatttttcggtttaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aaaccccagaattctttcgcggtaaagctaaaagcgtccaccacatttttcggtttaacc 175

                                          
Query: 181 ttatctaacttcacattcggcgatagctgaa 211
           |||||||||||||||||||||||||||||||
Sbjct: 174 ttatctaacttcacattcggcgatagctgaa 144