Miyakogusa Predicted Gene
- Lj3g3v2907330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2907330.1 Non Chatacterized Hit- tr|I1KAP9|I1KAP9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,37.63,2e-19,F_box_assoc_1: F-box protein interaction domain,F-box
associated interaction domain,CUFF.44944.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79504 weakly similar to UniRef100_A7Q9Q0 Cluster: Chr... 478 e-134
gnl|LJGI|TC74519 196 1e-49
gnl|LJGI|FS330715 similar to UniRef100_A7PQD5 Cluster: Chromosom... 109 2e-23
gnl|LJGI|TC67215 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 105 3e-22
gnl|LJGI|TC81656 72 4e-12
gnl|LJGI|FS338367 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 68 6e-11
gnl|LJGI|FS344553 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 64 1e-09
gnl|LJGI|FS322848 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 62 4e-09
gnl|LJGI|FS319657 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 62 4e-09
gnl|LJGI|GO034058 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 60 2e-08
gnl|LJGI|TC58891 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 60 2e-08
gnl|LJGI|TC58640 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 58 6e-08
gnl|LJGI|FS336312 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 52 4e-06
>gnl|LJGI|TC79504 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 551
Score = 478 bits (241), Expect = e-134
Identities = 277/284 (97%), Gaps = 5/284 (1%)
Strand = Plus / Plus
Query: 1 atggacttggaggaatcacttcaccctgatcgtatttctgaactaatagattatgacttt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 273 atggacttggaggaatcacttcaccctgatcgtatttctgaactaattgattatgacttt 332
Query: 61 ccatatactgttccctatattgtaggttcgtgtagaggctttctgctaattggctatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ccatatactgttccctatattgtaggttcgtgtagaggctttctgctaattggctatgat 392
Query: 121 cgaggtagaagtctctctatatggaatccatccacacatgtccacaaaccattacctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cgaggtagaagtctctctatatggaatccatccacacatgtccacaaaccattacctgtt 452
Query: 181 gacgccaatgcttatgaatatgatcatatgtatccatatgaatatggatttggttacgat 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 453 gacgccaatgcttatgaatatgatcatatgtatccatatgaatatgga-ttggttac--a 509
Query: 241 tcatcaaaagatgactacctcgtggttcgagtccctggtgtaaa 284
||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 510 tcatcaaaagatgacta-ctcgtggttcgagt-cctggtgtaaa 551
>gnl|LJGI|TC74519
Length = 592
Score = 196 bits (99), Expect = 1e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 457 gccattcactgggtggctcagaacttcgtggctggtcgtgtgacgcattttatcattgcc 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccattcactgggtggctcagaacttcgtggctggtcgtgtgacgcattttatcattgcc 60
Query: 517 tttgatttaatggaaaagagacttttagagataccccag 555
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgatttaatggaaaagagacttttagagataccccag 99
>gnl|LJGI|FS330715 similar to UniRef100_A7PQD5 Cluster: Chromosome chr18 scaffold_24,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_24, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 812
Score = 109 bits (55), Expect = 2e-23
Identities = 130/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 222 atatggatttggttacgattcatcaaaagatgactacctcgtggttcgagtccctggt-- 279
|||||||||||||||| |||| ||||||||||||||| | ||||||| ||| |||| |
Sbjct: 546 atatggatttggttaccattcctcaaaagatgactacttggtggttcaagtgcctgttcc 605
Query: 280 gtaaaaccaggctcatctactaattttgcagatgtgcagtttttctcattgagagctaat 339
||| || | || | ||||| |||| || ||||||||||||||||||| |||||||||
Sbjct: 606 gtacaattacgc--aactacttatttaccacatgtgcagtttttctcattcagagctaat 663
Query: 340 atttggaaatatactgagagtgttgatttgcct 372
|| ||||||||||||||| ||||||||||||||
Sbjct: 664 atgtggaaatatactgagggtgttgatttgcct 696
Score = 81.8 bits (41), Expect = 4e-15
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 439 gggttgctcttcaacgaggccattcactgggtggctcagaacttcgtggctggtcgtgtg 498
||||||||||||||||||||||||||||||||||||| |||| |||| |||| | |
Sbjct: 724 gggttgctcttcaacgaggccattcactgggtggctcgaaactgggtggatggtattacg 783
Query: 499 acgcattttatcattgcctttgatttaat 527
|| ||||||| |||||||||||||||||
Sbjct: 784 acatattttattattgcctttgatttaat 812
>gnl|LJGI|TC67215 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1843
Score = 105 bits (53), Expect = 3e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 308 cagatgtgcagtttttctcattgagagctaatatttggaaatatactgagagtgttgatt 367
|||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||
Sbjct: 870 cagatgtgcagtttttctcattgagagctaatatgtggaaatataccgagggtgttgatt 929
Query: 368 tgcct 372
|||||
Sbjct: 930 tgcct 934
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 505 tttatcattgcctttgatttaatggaaaagagacttttagagataccc 552
||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1028 tttattattgcctttgatttaatggaaaagagactcttagagataccc 1075
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaaccattacc 176
|||||||||||||||||||||||||||||| ||||
Sbjct: 710 tggaatccatccacacatgtccacaaaccaatacc 744
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 ggttcgtgtagaggctttctgctaat 110
||||||||||||||||||||||||||
Sbjct: 629 ggttcgtgtagaggctttctgctaat 654
>gnl|LJGI|TC81656
Length = 1322
Score = 71.9 bits (36), Expect = 4e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 439 gggttgctcttcaacgaggccattcactgggtggct 474
||||||||||||||||||||||||||||||||||||
Sbjct: 741 gggttgctcttcaacgaggccattcactgggtggct 776
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 312 tgtgcagtttttctcattgagagctaatatttggaaat 349
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 647 tgtgcagtttttctcaatgagagctaatatgtggaaat 684
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 506 ttatcattgcctttgatttaatggaaaagagacttttagagatacc 551
|||| |||| ||||||||| |||||||||||| |||||||||||||
Sbjct: 802 ttattattgtctttgatttgatggaaaagagaattttagagatacc 847
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaac 169
||||||||||||||||||||||||||||
Sbjct: 489 tggaatccatccacacatgtccacaaac 516
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 attgtaggttcgtgtagaggctttctgcta 108
|||||||| |||||||||||||||||||||
Sbjct: 420 attgtaggctcgtgtagaggctttctgcta 449
>gnl|LJGI|FS338367 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 836
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 308 cagatgtgcagtttttctcattgagagctaatat 341
||||||||||||||||||||||||||||||||||
Sbjct: 801 cagatgtgcagtttttctcattgagagctaatat 834
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaaccattacc 176
|||||||||||||||||||||||||||||| ||||
Sbjct: 641 tggaatccatccacacatgtccacaaaccaatacc 675
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 attgtaggttcgtgtagaggctttctgctaat 110
|||| |||||||||||||||||||||||||||
Sbjct: 554 attgaaggttcgtgtagaggctttctgctaat 585
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 225 tggatttggttacgattcatcaaaagatgactacctcgtggttcgagt 272
|||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct: 718 tggatttggttacgattcctcgacagatgactacttggtggttcgagt 765
>gnl|LJGI|FS344553 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 803
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaaccattacct 177
|||||||||||||||||||||||||||||| |||||
Sbjct: 647 tggaatccatccacacatgtccacaaaccaatacct 682
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 attgtaggttcgtgtagaggctttctgctaat 110
|||| |||||||||||||||||||||||||||
Sbjct: 560 attgaaggttcgtgtagaggctttctgctaat 591
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 225 tggatttggttacgattcatcaaaagatgactacctcgtggttcgagt 272
|||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct: 724 tggatttggttacgattcctcgacagatgactacttggtggttcgagt 771
>gnl|LJGI|FS322848 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 788
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaaccattacc 176
|||||||||||||||||||||||||||||| ||||
Sbjct: 666 tggaatccatccacacatgtccacaaaccaatacc 700
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 attgtaggttcgtgtagaggctttctgctaat 110
|||| |||||||||||||||||||||||||||
Sbjct: 579 attgaaggttcgtgtagaggctttctgctaat 610
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 225 tggatttggttacgattcatcaaaagatgactacctcgtggttcga 270
|||||||||||||||||| || | |||||||||| | |||||||||
Sbjct: 743 tggatttggttacgattcctcgacagatgactacttggtggttcga 788
>gnl|LJGI|FS319657 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 799
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaaccattacc 176
|||||||||||||||||||||||||||||| ||||
Sbjct: 664 tggaatccatccacacatgtccacaaaccaatacc 698
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 225 tggatttggttacgattcatcaaaagatgactacctcgtggttcgagt 272
|||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct: 741 tggatttggttacgattcctcgacagatgactacttggtggttcgagt 788
>gnl|LJGI|GO034058 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 682
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaacca 171
||||||||||||||||||||||||||||||
Sbjct: 573 tggaatccatccacacatgtccacaaacca 602
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 ggttcgtgtagaggctttctgctaat 110
||||||||||||||||||||||||||
Sbjct: 492 ggttcgtgtagaggctttctgctaat 517
>gnl|LJGI|TC58891 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 825
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 142 tggaatccatccacacatgtccacaaacca 171
||||||||||||||||||||||||||||||
Sbjct: 723 tggaatccatccacacatgtccacaaacca 752
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 ggttcgtgtagaggctttctgctaat 110
||||||||||||||||||||||||||
Sbjct: 642 ggttcgtgtagaggctttctgctaat 667
>gnl|LJGI|TC58640 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1577
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 311 atgtgcagtttttctcattgagagctaatatttggaaatat 351
|||||||||| ||||||||||||| |||||| |||||||||
Sbjct: 853 atgtgcagttcttctcattgagagataatatgtggaaatat 893
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 438 tgggttgctcttcaacgaggccattcactgggtggct 474
||||||||||||||||||| ||||||||||| |||||
Sbjct: 959 tgggttgctcttcaacgagaccattcactggttggct 995
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 506 ttatcattgcctttgatttaatggaaaagagacttttagagatacccca 554
|||| |||||||||||||||| ||| ||||||||| ||||||| |||||
Sbjct: 1021 ttattattgcctttgatttaacggagaagagacttctagagattcccca 1069
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 78 tattgtaggttcgtgtagaggctttctgct 107
|||||||||||| |||||||||||||||||
Sbjct: 647 tattgtaggttcatgtagaggctttctgct 676
>gnl|LJGI|FS336312 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 680
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 ggttcgtgtagaggctttctgctaat 110
||||||||||||||||||||||||||
Sbjct: 584 ggttcgtgtagaggctttctgctaat 609