Miyakogusa Predicted Gene

Lj3g3v2905160.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2905160.1 Non Chatacterized Hit- tr|I1KFD3|I1KFD3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,74.59,0,HRDC,Helicase/RNase D C-terminal, HRDC domain; no
description,NULL; POLYMYOSITIS/SCLERODERMA
AUTOANT,NODE_61206_length_2535_cov_8.537278.path2.1
         (2136 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59839 similar to UniRef100_A7PX27 Cluster: Chromosome...   884   0.0  
gnl|LJGI|TC59925 similar to UniRef100_A7PX27 Cluster: Chromosome...   452   e-126

>gnl|LJGI|TC59839 similar to UniRef100_A7PX27 Cluster: Chromosome chr12 scaffold_36,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_36, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (8%)
          Length = 787

 Score =  884 bits (446), Expect = 0.0
 Identities = 449/450 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1687 gcagtgccacaactggagaatgatgttggttgcgctccgggtgatgaggacgcattgaat 1746
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gcagtgccacaactggagaatcatgttggttgcgctccgggtgatgaggacgcattgaat 60

                                                                        
Query: 1747 gatgatgctcatgatggagaacttttgatggaaaaagatgatctagggaaccccttatta 1806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gatgatgctcatgatggagaacttttgatggaaaaagatgatctagggaaccccttatta 120

                                                                        
Query: 1807 gcttctgaccttgcagttgatgcagctatttcaaatggagattataatgaaggtgggaac 1866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gcttctgaccttgcagttgatgcagctatttcaaatggagattataatgaaggtgggaac 180

                                                                        
Query: 1867 tctttaaatgttgataacagtctgagcagaacgctaccaaatggagttagcgacttgttt 1926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tctttaaatgttgataacagtctgagcagaacgctaccaaatggagttagcgacttgttt 240

                                                                        
Query: 1927 gatccctccaaatatgaagaatcaacactagcgaagcataattcgaaactatcactcttg 1986
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gatccctccaaatatgaagaatcaacactagcgaagcataattcgaaactatcactcttg 300

                                                                        
Query: 1987 ggacatggaccacacgggaatttagttgtagaacatttactgaaggagtttggtgaagag 2046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ggacatggaccacacgggaatttagttgtagaacatttactgaaggagtttggtgaagag 360

                                                                        
Query: 2047 ggtattggagagttttgtcaaagatggagacaagtatttgtggatgctgtaaatccacga 2106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ggtattggagagttttgtcaaagatggagacaagtatttgtggatgctgtaaatccacga 420

                                          
Query: 2107 tttcttcctggtggttgggatgtgaaacac 2136
            ||||||||||||||||||||||||||||||
Sbjct: 421  tttcttcctggtggttgggatgtgaaacac 450


>gnl|LJGI|TC59925 similar to UniRef100_A7PX27 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 774

 Score =  452 bits (228), Expect = e-126
 Identities = 228/228 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaatccttcgcccagtttttgctaatccttccatttgtaaagtgttccatggagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atgggaatccttcgcccagtttttgctaatccttccatttgtaaagtgttccatggagct 606

                                                                       
Query: 61  gacaatgatattctctggctacagagggacttccatatttatgttgttaatctttttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gacaatgatattctctggctacagagggacttccatatttatgttgttaatctttttgat 666

                                                                       
Query: 121 acttctaaggcatgtgaagtgctttcaaaaccacagaaatcacttgcttatttgctagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acttctaaggcatgtgaagtgctttcaaaaccacagaaatcacttgcttatttgctagaa 726

                                                           
Query: 181 acttactgtggcgtggtgacaaataaattattacagcgtgaagactgg 228
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 acttactgtggcgtggtgacaaataaattattacagcgtgaagactgg 774