Miyakogusa Predicted Gene
- Lj3g3v2905120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2905120.1 Non Chatacterized Hit- tr|O49369|O49369_ARATH
Putative uncharacterized protein AT4g32210
OS=Arabidop,42.64,2e-18,SUCCINATE DEHYDROGENASE CYTOCHROME B560
SUBUNIT,NULL; seg,NULL; Fumarate reductase respiratory
compl,CUFF.45149.1
(660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69251 similar to UniRef100_Q94FP3 Cluster: Succinate ... 1164 0.0
gnl|LJGI|TC77084 similar to UniRef100_Q94FP3 Cluster: Succinate ... 1033 0.0
>gnl|LJGI|TC69251 similar to UniRef100_Q94FP3 Cluster: Succinate dehydrogenase
subunit 3; n=1; Glycine max|Rep: Succinate dehydrogenase
subunit 3 - Glycine max (Soybean), partial (80%)
Length = 991
Score = 1164 bits (587), Expect = 0.0
Identities = 587/587 (100%)
Strand = Plus / Plus
Query: 74 accgcaccgctccgcctcagatcggagcaaccaccgctaccggtggtgaaaacacttcca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 accgcaccgctccgcctcagatcggagcaaccaccgctaccggtggtgaaaacacttcca 183
Query: 134 ggggaaacttgaccggtcttcccaaagattccaatgacttcagctccttgagattcaatg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggggaaacttgaccggtcttcccaaagattccaatgacttcagctccttgagattcaatg 243
Query: 194 cttatggactggacgctactctgctggctggagctagatatggtactaaagcttgtgctg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cttatggactggacgctactctgctggctggagctagatatggtactaaagcttgtgctg 303
Query: 254 ccaatggtccaatgcaaatgggagtcatggctagaagttttcagagaggtgcaggtcctg 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccaatggtccaatgcaaatgggagtcatggctagaagttttcagagaggtgcaggtcctg 363
Query: 314 aaccattgggactgaccagtcacaaacgttttatgagcgacacctcaagtaaaactactg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaccattgggactgaccagtcacaaacgttttatgagcgacacctcaagtaaaactactg 423
Query: 374 agacaaagccttatggtctacgtccattgtctcctcatcttcctgtttatcagccccaac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agacaaagccttatggtctacgtccattgtctcctcatcttcctgtttatcagccccaac 483
Query: 434 tttcttcgacactttcaattttcaatagaattgccggagcttccctagctgctatcattg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tttcttcgacactttcaattttcaatagaattgccggagcttccctagctgctatcattg 543
Query: 494 tggctttttatatgatatatatgaaaatgggtttgattagcctcacctatgattcattct 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tggctttttatatgatatatatgaaaatgggtttgattagcctcacctatgattcattct 603
Query: 554 accagtttgtattttactcatcaaaactcaacctactcgccattgagatttctgccttgg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 accagtttgtattttactcatcaaaactcaacctactcgccattgagatttctgccttgg 663
Query: 614 ccacaacctatcatctatacagtgcaatccgccatttactcgtatga 660
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ccacaacctatcatctatacagtgcaatccgccatttactcgtatga 710
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atgtcgttgcttctcagatccaccaagtccaag 33
|||||||||||||||||||||||||||||||||
Sbjct: 51 atgtcgttgcttctcagatccaccaagtccaag 83
>gnl|LJGI|TC77084 similar to UniRef100_Q94FP3 Cluster: Succinate dehydrogenase
subunit 3; n=1; Glycine max|Rep: Succinate dehydrogenase
subunit 3 - Glycine max (Soybean), partial (80%)
Length = 679
Score = 1033 bits (521), Expect = 0.0
Identities = 524/525 (99%)
Strand = Plus / Plus
Query: 74 accgcaccgctccgcctcagatcggagcaaccaccgctaccggtggtgaaaacacttcca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 accgcaccgctccgcctcagatcggagcaaccaccgctaccggtggtgaaaacacttcca 214
Query: 134 ggggaaacttgaccggtcttcccaaagattccaatgacttcagctccttgagattcaatg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggggaaacttgaccggtcttcccaaagattccaatgacttcagctccttgagattcaatg 274
Query: 194 cttatggactggacgctactctgctggctggagctagatatggtactaaagcttgtgctg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cttatggactggacgctactctgctggctggagctagatatggtactaaagcttgtgctg 334
Query: 254 ccaatggtccaatgcaaatgggagtcatggctagaagttttcagagaggtgcaggtcctg 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccaatggtccaatgcaaatgggagtcatggctagaagttttcagagaggtgcaggtcctg 394
Query: 314 aaccattgggactgaccagtcacaaacgttttatgagcgacacctcaagtaaaactactg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaccattgggactgaccagtcacaaacgttttatgagcgacacctcaagtaaaactactg 454
Query: 374 agacaaagccttatggtctacgtccattgtctcctcatcttcctgtttatcagccccaac 433
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 agacaaagccttatggtctacgtccattgtctcctcatcttcctgtttatcaaccccaac 514
Query: 434 tttcttcgacactttcaattttcaatagaattgccggagcttccctagctgctatcattg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttcttcgacactttcaattttcaatagaattgccggagcttccctagctgctatcattg 574
Query: 494 tggctttttatatgatatatatgaaaatgggtttgattagcctcacctatgattcattct 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tggctttttatatgatatatatgaaaatgggtttgattagcctcacctatgattcattct 634
Query: 554 accagtttgtattttactcatcaaaactcaacctactcgccattg 598
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 accagtttgtattttactcatcaaaactcaacctactcgccattg 679
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atgtcgttgcttctcagatccaccaagtccaag 33
|||||||||||||||||||||||||||||||||
Sbjct: 82 atgtcgttgcttctcagatccaccaagtccaag 114