Miyakogusa Predicted Gene
- Lj3g3v2888640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2888640.1 Non Chatacterized Hit- tr|I1GW99|I1GW99_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,30,3e-17,ZF_C3H1,Zinc finger, CCCH-type; seg,NULL; no
description,NULL; coiled-coil,NULL,CUFF.44936.1
(1338 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65394 weakly similar to UniRef100_A7PXJ1 Cluster: Chr... 1116 0.0
gnl|LJGI|TC58117 1051 0.0
gnl|LJGI|AV776901 similar to UniRef100_A7PXJ1 Cluster: Chromosom... 258 8e-68
gnl|LJGI|GO023371 194 1e-48
>gnl|LJGI|TC65394 weakly similar to UniRef100_A7PXJ1 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 845
Score = 1116 bits (563), Expect = 0.0
Identities = 577/584 (98%)
Strand = Plus / Plus
Query: 1 atggtcgaacggaagcaattcaagacaaggttatgcgtgctttatcagagaggccgttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atggtcgaacggaagcaattcaagacaaggttatgcgtgctttatcagagaggccgttgc 321
Query: 61 aaccgccataactgctccttcgctcatggaaatgctgagcttcgacgattctcttcgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaccgccataactgctccttcgctcatggaaatgctgagcttcgacgattctcttcgtct 381
Query: 121 tacagtggtaggagagactattcaagtaatgacttgagggataaacttgacagacgacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tacagtggtaggagagactattcaagtaatgacttgagggataaacttgacagacgacat 441
Query: 181 ttatcacctcggaggtactcaccagctcgagatgcaagaggccgccaggcaattcatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttatcacctcggaggtactcaccagctcgagatgcaagaggccgccaggcaattcatgaa 501
Query: 241 tacagtcccccaaggtctttggagnnnnnnngttccagtgacagaaaacacaggagaaaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 tacagtcccccaaggtctttggagaaaaaaagttccagtgacagaaaacacaggagaaaa 561
Query: 301 cagggcatcacttcccaaagtgataatgctgggagtttgaaagtctccgatagagttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cagggcatcacttcccaaagtgataatgctgggagtttgaaagtctccgatagagttcaa 621
Query: 361 gatcatgttaaagaagtaaaattgctttcctctggttctagaaatactcttgaggagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gatcatgttaaagaagtaaaattgctttcctctggttctagaaatactcttgaggagaag 681
Query: 421 ctgaagaaagtacattccgatatcaacacactagagaaccaaaaattccaactaacggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgaagaaagtacattccgatatcaacacactagagaaccaaaaattccaactaacggtc 741
Query: 481 tacattgacgagagtgttcaagaagtggatagccttaattctagaattcaggaactgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tacattgacgagagtgttcaagaagtggatagccttaattctagaattcaggaactgaag 801
Query: 541 gctcaattatgcaatgagaatgaggagtataaaagaattagttc 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gctcaattatgcaatgagaatgaggagtataaaagaattagttc 845
>gnl|LJGI|TC58117
Length = 809
Score = 1051 bits (530), Expect = 0.0
Identities = 530/530 (100%)
Strand = Plus / Plus
Query: 809 ccttcaaaaagaggctgcatgtggaacgagatgctgtggtggaagagttaaagcaagata 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttcaaaaagaggctgcatgtggaacgagatgctgtggtggaagagttaaagcaagata 60
Query: 869 gatcaaaactcgggcctttggttgagactgtaagaagcagtaaacgctctcgctggaatg 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcaaaactcgggcctttggttgagactgtaagaagcagtaaacgctctcgctggaatg 120
Query: 929 tgccttctcatttggatggcaagggttatgaggaccttgaggctccaaacaatggaactg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgccttctcatttggatggcaagggttatgaggaccttgaggctccaaacaatggaactg 180
Query: 989 aatatactaggcccctagatcttgaaggcaagcacaagaaaggaatacggaatccttctg 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatatactaggcccctagatcttgaaggcaagcacaagaaaggaatacggaatccttctg 240
Query: 1049 acaacctccattcagagaagttgaaggaatccaggattgaagtgccatcaaccagcatag 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaacctccattcagagaagttgaaggaatccaggattgaagtgccatcaaccagcatag 300
Query: 1109 cagctcatatatttgatgaggaagttgagattgaacttgatgacagaactgatataaatg 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagctcatatatttgatgaggaagttgagattgaacttgatgacagaactgatataaatg 360
Query: 1169 aaacatccaacacacaatatcagaatggagtggcatttggggtgaagggcgtccctctta 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaacatccaacacacaatatcagaatggagtggcatttggggtgaagggcgtccctctta 420
Query: 1229 tgcttcccccatctttggttcctcatagcaattactcgcagtatgagggtatcgaccaga 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcttcccccatctttggttcctcatagcaattactcgcagtatgagggtatcgaccaga 480
Query: 1289 atgtggatgtggatggtcttgatgatgaggcaggaaagggcacatgaaga 1338
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtggatgtggatggtcttgatgatgaggcaggaaagggcacatgaaga 530
>gnl|LJGI|AV776901 similar to UniRef100_A7PXJ1 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 588
Score = 258 bits (130), Expect = 8e-68
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 1 atggtcgaacggaagcaattcaagacaaggttatgcgtgctttatcagagaggccgttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggtcgaacggaagcaattcaagacaaggttatgcgtgctttatcagagaggccgttgc 300
Query: 61 aaccgccataactgctccttcgctcatggaaatgctgagcttcgacgattctcttcgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccgccataactgctccttcgctcatggaaatgctgagcttcgacgattctcttcgtct 360
Query: 121 tacagtggta 130
||||||||||
Sbjct: 361 tacagtggta 370
>gnl|LJGI|GO023371
Length = 106
Score = 194 bits (98), Expect = 1e-48
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 593 ggaagtttgttaaagtgcacaatcataacgtgcagttgcaagatgaactgaaaagatcac 652
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 1 ggaagtttgttaaagtgcacaatcatatcgtgcaattgcaagatgaactgaaaagatcac 60
Query: 653 agatccgacttgaaaggtttggagatcagcttgtatcagacatatc 698
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatccgacttgaaaggtttggagatcagcttgtatcagacatatc 106