Miyakogusa Predicted Gene
- Lj3g3v2888630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2888630.1 tr|A8J251|A8J251_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191680 PE=4
SV=1,36.77,0.000000000001,seg,NULL,CUFF.44912.1
(798 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57482 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 1540 0.0
gnl|LJGI|TC69117 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 747 0.0
gnl|LJGI|TC67209 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 595 e-169
gnl|LJGI|TC72781 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 331 4e-90
gnl|LJGI|AV775726 92 6e-18
>gnl|LJGI|TC57482 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1246
Score = 1540 bits (777), Expect = 0.0
Identities = 791/798 (99%)
Strand = Plus / Plus
Query: 1 atgctcatggcggattcctccaaagaagagttcttgcagctcatcaaacgcctcactctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atgctcatggcggattcctccaaagaagagttcttgcagctcatcaaacgcctcactctc 207
Query: 61 aagatttctaacatcatcgattcacactctattggggctgttgcgggtcttgccattgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagatttctaacatcatcgattcacactctattggggctgttgcgggtcttgccattgcg 267
Query: 121 annnnnnncacctggaggctgttgagatcacctggtgaacctcaaccgaggcaaagaaaa 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atttttttcacctggaggctgttgagatcacctggtgaacctcaaccgaggcaaagaaaa 327
Query: 181 cggcaaacgactacttctagtaatcctggagtcagtacacattcaaatgcctctgtagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cggcaaacgactacttctagtaatcctggagtcagtacacattcaaatgcctctgtagtt 387
Query: 241 ccttccggagttcgttccccctcgggcgattcaagggcacagaatgtagttgatgagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccttccggagttcgttccccctcgggcgattcaagggcacagaatgtagttgatgagctg 447
Query: 301 tttcagccagtcaagccaaccttgggccaaattgttaggcagaagttaaatgaaggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tttcagccagtcaagccaaccttgggccaaattgttaggcagaagttaaatgaaggaaga 507
Query: 361 aaggtaacttgtcgtcttcttggagtgatccttgaggaaactagtccagaggagcttcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaggtaacttgtcgtcttcttggagtgatccttgaggaaactagtccagaggagcttcag 567
Query: 421 aaacaagtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaacaagtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgc 627
Query: 481 gatttatatctcatggaacgagttctggatgatgaaagcgagaaaagagttcttgtagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gatttatatctcatggaacgagttctggatgatgaaagcgagaaaagagttcttgtagca 687
Query: 541 ttagaagatgctggggtatttacttctggtggtttggtcaaggacaaggtcctcttctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ttagaagatgctggggtatttacttctggtggtttggtcaaggacaaggtcctcttctgt 747
Query: 601 agcacagagattgggcgatcttcatttgttcggcaattggaaccagactggcatatcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agcacagagattgggcgatcttcatttgttcggcaattggaaccagactggcatatcgac 807
Query: 661 tcaaatcctgaaattatctctcagttagctagatttatcaaataccaacttcatgtctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tcaaatcctgaaattatctctcagttagctagatttatcaaataccaacttcatgtctct 867
Query: 721 ccttttagaacggaacgaactgctgctaacgtattcagtgctccgtccctggaacagttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ccttttagaacggaacgaactgctgctaacgtattcagtgctccgtccctggaacagttc 927
Query: 781 tttggatccacatgaaat 798
||||||||||||||||||
Sbjct: 928 tttggatccacatgaaat 945
>gnl|LJGI|TC69117 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 784
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 422 aacaagtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgcg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaagtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgcg 60
Query: 482 atttatatctcatggaacgagttctggatgatgaaagcgagaaaagagttcttgtagcat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttatatctcatggaacgagttctggatgatgaaagcgagaaaagagttcttgtagcat 120
Query: 542 tagaagatgctggggtatttacttctggtggtttggtcaaggacaaggtcctcttctgta 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagaagatgctggggtatttacttctggtggtttggtcaaggacaaggtcctcttctgta 180
Query: 602 gcacagagattgggcgatcttcatttgttcggcaattggaaccagactggcatatcgact 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcacagagattgggcgatcttcatttgttcggcaattggaaccagactggcatatcgact 240
Query: 662 caaatcctgaaattatctctcagttagctagatttatcaaataccaacttcatgtctctc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaatcctgaaattatctctcagttagctagatttatcaaataccaacttcatgtctctc 300
Query: 722 cttttagaacggaacgaactgctgctaacgtattcagtgctccgtccctggaacagttct 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttttagaacggaacgaactgctgctaacgtattcagtgctccgtccctggaacagttct 360
Query: 782 ttggatccacatgaaat 798
|||||||||||||||||
Sbjct: 361 ttggatccacatgaaat 377
>gnl|LJGI|TC67209 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1423
Score = 595 bits (300), Expect = e-169
Identities = 578/671 (86%), Gaps = 6/671 (0%)
Strand = Plus / Plus
Query: 133 tggaggctgttgagatcacctggtgaacctcaaccgaggcaaagaaaacggcaaacgact 192
||||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||
Sbjct: 313 tggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaaggtgct 372
Query: 193 acttctagtaat------cctggagtcagtacacattcaaatgcctctgtagttccttcc 246
| ||||||||| ||||||| || || ||||| |||||| |||||||||||
Sbjct: 373 tcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagttccttct 432
Query: 247 ggagttcgttccccctcgggcgattcaagggcacagaatgtagttgatgagctgtttcag 306
| || | ||| ||||| |||||||||||||| ||||| || |||||| | ||||||
Sbjct: 433 gaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttctttcag 492
Query: 307 ccagtcaagccaaccttgggccaaattgttaggcagaagttaaatgaaggaagaaaggta 366
|||||||||||||||||||| || || |||||||||||||| | ||||||||||||||||
Sbjct: 493 ccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaagaaaggta 552
Query: 367 acttgtcgtcttcttggagtgatccttgaggaaactagtccagaggagcttcagaaacaa 426
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcagaaacaa 612
Query: 427 gtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgcgattta 486
| ||||| | |||| ||||||| |||||||| |||||||||||||||| ||| ||||||
Sbjct: 613 gctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgtgattta 672
Query: 487 tatctcatggaacgagttctggatgatgaaagcgagaaaagagttcttgtagcattagaa 546
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 673 tatctcatggaacgagttctggatgacgaaagcgagaaaagagttcttgtagcgttagaa 732
Query: 547 gatgctggggtatttacttctggtggtttggtcaaggacaaggtcctcttctgtagcaca 606
|| || |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 733 gaagcaggggtattcacttcaggtggtttggttaaggacaaggttctcttctgcagcaca 792
Query: 607 gagattgggcgatcttcatttgttcggcaattggaaccagactggcatatcgactcaaat 666
|||| ||| || || ||||||||||| |||||||| ||||| |||||||||||| |||||
Sbjct: 793 gagaatggacggtcatcatttgttcgacaattggagccagattggcatatcgacacaaat 852
Query: 667 cctgaaattatctctcagttagctagatttatcaaataccaacttcatgtctctcctttt 726
||||||||| ||| ||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 853 cctgaaattgtctttcagttagccaggtttatcaagtatcaactccatgtatctcctcac 912
Query: 727 agaacggaacgaactgctgctaacgtattcagtgctccgtccctggaacagttctttgga 786
| || ||||||||||||| ||| || ||||||||||| ||||||||| ||||||||||
Sbjct: 913 aaaagcgaacgaactgctggtaatgtgttcagtgctccagccctggaactgttctttgga 972
Query: 787 tccacatgaaa 797
|||| ||||||
Sbjct: 973 tccatatgaaa 983
>gnl|LJGI|TC72781 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 730
Score = 331 bits (167), Expect = 4e-90
Identities = 331/386 (85%), Gaps = 6/386 (1%)
Strand = Plus / Plus
Query: 133 tggaggctgttgagatcacctggtgaacctcaaccgaggcaaagaaaacggcaaacgact 192
||||||||||||||||| |||||||| ||||||| ||||||| |||||||||| ||
Sbjct: 345 tggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaaggtgct 404
Query: 193 acttctagtaat------cctggagtcagtacacattcaaatgcctctgtagttccttcc 246
| ||||||||| ||||||| || || ||||| |||||| |||||||||||
Sbjct: 405 tcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagttccttct 464
Query: 247 ggagttcgttccccctcgggcgattcaagggcacagaatgtagttgatgagctgtttcag 306
| || | ||| ||||| |||||||||||||| ||||| || |||||| | ||||||
Sbjct: 465 gaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttctttcag 524
Query: 307 ccagtcaagccaaccttgggccaaattgttaggcagaagttaaatgaaggaagaaaggta 366
|||||||||||||||||||| || || |||||||||||||| | ||||||||||||||||
Sbjct: 525 ccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaagaaaggta 584
Query: 367 acttgtcgtcttcttggagtgatccttgaggaaactagtccagaggagcttcagaaacaa 426
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcagaaacaa 644
Query: 427 gtgactgtgaaatccactgtgcttgaagtattattggaaataacaaaattttgcgattta 486
| ||||| | |||| ||||||| |||||||| |||||||||||||||| ||| ||||||
Sbjct: 645 gctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgtgattta 704
Query: 487 tatctcatggaacgagttctggatga 512
||||||||||||||||||||||||||
Sbjct: 705 tatctcatggaacgagttctggatga 730
>gnl|LJGI|AV775726
Length = 444
Score = 91.7 bits (46), Expect = 6e-18
Identities = 93/102 (91%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 691 agatttatcaaataccaacttca-tgtctctccttttagaacggaacgaactgctgctaa 749
||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 444 agatttatccaatacccacttcactgtctctccttttagaacggaacggactgctgct-a 386
Query: 750 cgtattca-gtgctccgt-ccctggaaca-gttctttggatc 788
|||||||| ||||||||| ||||||| || ||||||||||||
Sbjct: 385 cgtattcacgtgctccgtcccctggaccacgttctttggatc 344