Miyakogusa Predicted Gene
- Lj3g3v2888290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2888290.1 Non Chatacterized Hit- tr|F6GXQ0|F6GXQ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,54.29,0,no
description,Bulb-type lectin domain; no description,NULL; Protein
kinase-like (PK-like),Protein k,CUFF.44879.1
(2784 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS355518 similar to UniRef100_A7QC50 Cluster: Chromosom... 80 8e-14
gnl|LJGI|TC60125 similar to UniRef100_A7PXP7 Cluster: Chromosome... 70 8e-11
gnl|LJGI|TC74618 similar to UniRef100_A7R4W5 Cluster: Chromosome... 64 5e-09
gnl|LJGI|TC62923 weakly similar to UniRef100_Q70I29 Cluster: S-r... 58 3e-07
gnl|LJGI|TC57128 UniRef100_Q70I28 Cluster: S-receptor kinase-lik... 58 3e-07
gnl|LJGI|TC82662 similar to UniRef100_Q9XED4 Cluster: Receptor-l... 54 5e-06
gnl|LJGI|TC57130 UniRef100_Q70I30 Cluster: S-receptor kinase-lik... 54 5e-06
>gnl|LJGI|FS355518 similar to UniRef100_A7QC50 Cluster: Chromosome chr10 scaffold_76,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_76, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 711
Score = 79.8 bits (40), Expect = 8e-14
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 2620 gttggaacctatgggtacatgtctccagagtatgcacttgatggacatttttcagtgaag 2679
||||| || ||||| || ||||||||||| |||||| | ||||||| || || |||||
Sbjct: 516 gttgggacatatggctatatgtctccagaatatgcaatgcatggacaattctctgtgaaa 457
Query: 2680 tctgatgtgtttagctttggtgtggtggtacttgagattattagtggaaaaaggaa 2735
|||||||||||||| ||||| || |||| || ||||||||||||||||| |||||
Sbjct: 456 tctgatgtgtttagttttggggtcatggttctagagattattagtggaaagaggaa 401
>gnl|LJGI|TC60125 similar to UniRef100_A7PXP7 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1519
Score = 69.9 bits (35), Expect = 8e-11
Identities = 197/251 (78%)
Strand = Plus / Plus
Query: 2500 cacagagacttgaaagcaagcaatattctactagatgaagagaagaatcctaaaatctca 2559
||||||||||||||| | ||||| ||||| |||||| |||| | | || ||||| |||
Sbjct: 712 cacagagacttgaaaactagcaacattcttttagatggtgagatgcaaccaaaaatttca 771
Query: 2560 gactttggcttagctagaatatttggaggaaaagatacagtaggaaacacagatagagtg 2619
|||||||| || || |||||||||||||| ||||| || | | |||||| | || ||
Sbjct: 772 gactttggattggcgagaatatttggaggcaaagagactgaggcaaacactcagagggta 831
Query: 2620 gttggaacctatgggtacatgtctccagagtatgcacttgatggacatttttcagtgaag 2679
|| || || ||||| ||| ||||||| || |||||| | |||||||| || ||| ||
Sbjct: 832 gtggggacatatggatacgtgtctcctgaatatgcattggatggacaattctcaaccaaa 891
Query: 2680 tctgatgtgtttagctttggtgtggtggtacttgagattattagtggaaaaaggaacact 2739
|| ||| | || ||||||||||| || | ||||||||||| ||||| |||| |||||
Sbjct: 892 tcggatattttcagctttggtgttgtcttgcttgagattatcagtgggaaaaaaaacaca 951
Query: 2740 ggattttatca 2750
|||||||||||
Sbjct: 952 ggattttatca 962
>gnl|LJGI|TC74618 similar to UniRef100_A7R4W5 Cluster: Chromosome undetermined
scaffold_798, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_798, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(56%)
Length = 1079
Score = 63.9 bits (32), Expect = 5e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 2620 gttggaacctatgggtacatgtctccagagtatgcacttgatggacatttttcagtgaag 2679
|||||||||||||| || ||| | |||||||||||| | |||||||||||||||||||
Sbjct: 232 gttggaacctatggatatatggcaccagagtatgcaatgcatggacatttttcagtgaaa 291
Query: 2680 tctgatgt 2687
|| |||||
Sbjct: 292 tcagatgt 299
Score = 58.0 bits (29), Expect = 3e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2512 aaagcaagcaatattctactagatgaagagaagaatcctaa 2552
||||||||||||||||| |||||||||||| |||||||||
Sbjct: 124 aaagcaagcaatattctcttagatgaagagatgaatcctaa 164
>gnl|LJGI|TC62923 weakly similar to UniRef100_Q70I29 Cluster: S-receptor kinase-like
protein 2; n=1; Lotus japonicus|Rep: S-receptor
kinase-like protein 2 - Lotus japonicus, partial (16%)
Length = 766
Score = 58.0 bits (29), Expect = 3e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 2604 aaacacagatagagtggttggaacctatgggtacatgtctccaga 2648
||||||| ||||||||| |||||| ||||| ||||||||||||||
Sbjct: 25 aaacacaaatagagtggctggaacatatggctacatgtctccaga 69
>gnl|LJGI|TC57128 UniRef100_Q70I28 Cluster: S-receptor kinase-like protein 3; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 3 -
Lotus japonicus, complete
Length = 2481
Score = 58.0 bits (29), Expect = 3e-07
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 2614 agagtggttggaacctatgggtacatgtctccagagtatgcacttgatggacatttttca 2673
|||||| | ||||| ||||| || ||||||||||||||||| | ||||| ||||||
Sbjct: 1849 agagtgatgggaacatatggctatatgtctccagagtatgcggtgcatggatccttttca 1908
Query: 2674 gtgaagtctgatgtgtttagctttggtgtggtggtacttgagattattagtgg 2726
|| || |||||||| ||||||||||| || | || |||||||| ||||||||
Sbjct: 1909 gtaaaatctgatgtttttagctttggcgtaatcgtgcttgagataattagtgg 1961
>gnl|LJGI|TC82662 similar to UniRef100_Q9XED4 Cluster: Receptor-like protein kinase
homolog RK20-1; n=1; Phaseolus vulgaris|Rep:
Receptor-like protein kinase homolog RK20-1 - Phaseolus
vulgaris (Kidney bean) (French bean), partial (24%)
Length = 792
Score = 54.0 bits (27), Expect = 5e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2660 atggacatttttcagtgaagtctgatgtgtttagctttggtgtggtggtacttgagatta 2719
||||||| |||||||| || || ||||| || || |||||||| |||| ||||||||||
Sbjct: 149 atggacaattttcagtaaaatcagatgtcttcagttttggtgtactggttcttgagatta 208
Query: 2720 ttagtgg 2726
|||||||
Sbjct: 209 ttagtgg 215
>gnl|LJGI|TC57130 UniRef100_Q70I30 Cluster: S-receptor kinase-like protein 1; n=1;
Lotus japonicus|Rep: S-receptor kinase-like protein 1 -
Lotus japonicus, complete
Length = 2061
Score = 54.0 bits (27), Expect = 5e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 2680 tctgatgtgtttagctttggtgtggtggtacttgagattattagtgg 2726
|||||||| |||||||||||||| | ||||||||||| ||||||||
Sbjct: 1666 tctgatgtttttagctttggtgtaatcgtacttgagataattagtgg 1712