Miyakogusa Predicted Gene
- Lj3g3v2862530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2862530.1 Non Chatacterized Hit- tr|K4DCP0|K4DCP0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.95,4e-19,
,CUFF.44858.1
(282 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66804 similar to UniRef100_A7P1F9 Cluster: Chromosome... 559 e-159
gnl|LJGI|DC595956 UniRef100_A0RVY3 Cluster: Ribosomal protein L1... 210 3e-54
gnl|LJGI|TC66732 weakly similar to UniRef100_A7PXF2 Cluster: Chr... 178 1e-44
>gnl|LJGI|TC66804 similar to UniRef100_A7P1F9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 615
Score = 559 bits (282), Expect = e-159
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 1 atggcctctctcgtccgtggagccgcatctctaagccgcactgccatttccgcttccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggcctctctcgtccgtggagccgcatctctaagccgcactgccatttccgcttccaaa 147
Query: 61 tctccgatccaactcctccaccgccgcaacttcgccggagccgcagatcatcatggccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tctccgatccaactcctccaccgccgcaacttcgccggagccgcagatcatcatggccct 207
Query: 121 gctaaagttgacttttggaaagacccaatgagcccatctaaatggaaggaagagcacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gctaaagttgacttttggaaagacccaatgagcccatctaaatggaaggaagagcacttt 267
Query: 181 gtgattgtctctttaactggctggggactactcatctatggaggatacaagttagccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtgattgtctctttaactggctggggactactcatctatggaggatacaagttagccacc 327
Query: 241 ggaggcaagaaagaagagaaattggtgaaagcatcacagtga 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggaggcaagaaagaagagaaattggtgaaagcatcacagtga 369
>gnl|LJGI|DC595956 UniRef100_A0RVY3 Cluster: Ribosomal protein L14; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L14 - Cenarchaeum
symbiosum, partial (8%)
Length = 453
Score = 210 bits (106), Expect = 3e-54
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 atggcctctctcgtccgtggagccgcatctctaagccgcactgccatttccgcttccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atggcctctctcgtccgtggagccgcatctctaagccgcactgccatttccgcttccaaa 113
Query: 61 tctccgatccaactcctccaccgccgcaacttcgccggagccgcag 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tctccgatccaactcctccaccgccgcaacttcgccggagccgcag 159
>gnl|LJGI|TC66732 weakly similar to UniRef100_A7PXF2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 914
Score = 178 bits (90), Expect = 1e-44
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 17 gtggagccgcatctctaagccgcactgccatttccgcttccaaatctccgatccaactcc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtggagccgcatctctaagccgcactgccatttccgcttccaaatctccgatccaactcc 61
Query: 77 tccaccgccgcaacttcgccggagccgcag 106
||||||||||||||||||||||||||||||
Sbjct: 62 tccaccgccgcaacttcgccggagccgcag 91