Miyakogusa Predicted Gene
- Lj3g3v2862510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2862510.1 tr|A9TIQ0|A9TIQ0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146163,46.51,1e-18, ,CUFF.44823.1
(304 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66732 weakly similar to UniRef100_A7PXF2 Cluster: Chr... 509 e-144
gnl|LJGI|TC74029 weakly similar to UniRef100_A7PXF2 Cluster: Chr... 323 4e-88
gnl|LJGI|BW614689 similar to UniRef100_A7PXF2 Cluster: Chromosom... 163 8e-40
>gnl|LJGI|TC66732 weakly similar to UniRef100_A7PXF2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 914
Score = 509 bits (257), Expect = e-144
Identities = 290/301 (96%)
Strand = Plus / Plus
Query: 4 ggtctcaaggttggctttgaggtcggtgaggaactaggtttctacagcggttgcctccat 63
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 363 ggtctcaaggttggctttgaggttggtgaggaactaggtttctacagcggttgcttccat 422
Query: 64 atctggacctctgccatccggcttgacccgaattgtttctcctccagggccaaaactacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atctggacctctgccatccggcttgacccgaattgtttctcctccagggccaaaactacc 482
Query: 124 attaaccagatgcaggacctggtccacaaatatcctctcatggatccagaagatctgcag 183
||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 483 attgaccagatgcaggacctggtcggcaaatatcctctcacggatccagaagatctgcag 542
Query: 184 gtgcaagcgatcatggatagcctcaggctcaagttcaagatgctttgttcttctctgcac 243
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 543 gtgcaagagatcatggatagcctcagggtcaagttcaagatgctttgttcttctctgcac 602
Query: 244 gtcaagcttgactacagcgtctatccaaattcttcggaggccaccagcattcagttttga 303
|||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 603 gtcaagcttgactacaacggctatccaaattcttccgaggccaccagcattcagttttga 662
Query: 304 a 304
|
Sbjct: 663 a 663
>gnl|LJGI|TC74029 weakly similar to UniRef100_A7PXF2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 486
Score = 323 bits (163), Expect = 4e-88
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 2 tgggtctcaaggttggctttgaggtcggtgaggaactaggtttctacagcggttgcctcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgggtctcaaggttggctttgaggtcggtgaggaactaggtttctacagcggttgcctcc 383
Query: 62 atatctggacctctgccatccggcttgacccgaattgtttctcctccagggccaaaacta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atatctggacctctgccatccggcttgacccgaattgtttctcctccagggccaaaacta 443
Query: 122 ccattaaccagatgcaggacctggtccacaaatatcctctcat 164
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccattaaccagatgcaggacctggtccacaaatatcctctcat 486
>gnl|LJGI|BW614689 similar to UniRef100_A7PXF2 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 475
Score = 163 bits (82), Expect = 8e-40
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 2 tgggtctcaaggttggctttgaggtcggtgaggaactaggtttctacagcggttgcctcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgggtctcaaggttggctttgaggtcggtgaggaactaggtttctacagcggttgcctcc 453
Query: 62 atatctggacctctgccatccg 83
||||||||||||||||||||||
Sbjct: 454 atatctggacctctgccatccg 475