Miyakogusa Predicted Gene

Lj3g3v2851210.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2851210.1 Non Chatacterized Hit- tr|J2KCC6|J2KCC6_9DELT
Uncharacterized protein OS=Chondromyces apiculatus
DSM,36.67,5.5,coiled-coil,NULL,
NODE_94443_length_741_cov_7.161943.path2.1
         (630 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP037888                                                     289   1e-77
gnl|LJGI|BP037565                                                     115   3e-25
gnl|LJGI|GO040426 similar to UniRef100_A7BS46 Cluster: Transposa...    62   4e-09

>gnl|LJGI|BP037888 
          Length = 522

 Score =  289 bits (146), Expect = 1e-77
 Identities = 170/178 (95%)
 Strand = Plus / Minus

                                                                       
Query: 453 cctctctgtcggtgatcccaacaccttgggctgtattccatgccatttggtaaccgccaa 512
           ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 522 cctctttgtcggtgatccgaacaccttgggctgtattccatgccatttggtaaccgccca 463

                                                                       
Query: 513 acgacctccggcaaagccaccggattcaggcttccttcatgtgaaatcagttggcaaatc 572
           |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 462 acgacctccggccaagccaccggattcaggcttccttcatgtgaaatccgttggccaatc 403

                                                                     
Query: 573 tgtggccatagtgcaagaaacttttctgaattatcaccttggggacaaggtggatctt 630
           |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 402 tgtggccatagtgccagaaacttttctgaattatcaccttggggaccaggtggatctt 345


>gnl|LJGI|BP037565 
          Length = 433

 Score =  115 bits (58), Expect = 3e-25
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                       
Query: 477 cttgggctgtattccatgccatttggtaaccgccaaacgacctccggcaaagccaccgga 536
           ||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||
Sbjct: 433 cttgggctgtattccatgccatttggtaaccaccaagcaacctccggcaaagccaccaga 374

                         
Query: 537 ttcaggcttccttc 550
           ||||||||||||||
Sbjct: 373 ttcaggcttccttc 360



 Score =  105 bits (53), Expect = 3e-22
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                
Query: 578 ccatagtgcaagaaacttttctgaattatcaccttggggacaaggtggatctt 630
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccatagtgcaagaaacttttctgaattatcaccttggggacaaggtggatctt 308


>gnl|LJGI|GO040426 similar to UniRef100_A7BS46 Cluster: Transposase, IS4; n=1;
           Beggiatoa sp. PS|Rep: Transposase, IS4 - Beggiatoa sp.
           PS, partial (8%)
          Length = 787

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 97/117 (82%), Gaps = 4/117 (3%)
 Strand = Plus / Minus

                                                                       
Query: 514 cgacctccggcaaagccaccggattcaggcttccttcatgtgaaatcagttggcaaatct 573
           ||||| ||| |||||||||||||| |||||||||||| ||||| |  | ||||  |||||
Sbjct: 406 cgacccccgccaaagccaccggatacaggcttccttcgtgtgagaaaaattgg-gaatct 348

                                                                    
Query: 574 gtggccatagtgcaagaaacttttctgaattatcaccttggggacaaggtggatctt 630
           ||||||||| | ||||   |||||  | |||||||||||| |||||||||| |||||
Sbjct: 347 gtggccataattcaag---ctttttcggattatcaccttgaggacaaggtgaatctt 294