Miyakogusa Predicted Gene
- Lj3g3v2848820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2848820.1 Non Chatacterized Hit- tr|A3AXJ3|A3AXJ3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,49.48,5e-16,BROMODOMAIN_2,Bromodomain; BROMODOMAIN,Bromodomain;
Bromodomain,Bromodomain; bromo domain,Bromodomai,CUFF.44804.1
(1773 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67348 similar to UniRef100_A7PJE3 Cluster: Chromosome... 1148 0.0
gnl|LJGI|TC71957 similar to UniRef100_A7PJE3 Cluster: Chromosome... 880 0.0
gnl|LJGI|BW616918 similar to UniRef100_A7PJE3 Cluster: Chromosom... 492 e-138
gnl|LJGI|TC80307 similar to UniRef100_A7PJE3 Cluster: Chromosome... 414 e-115
gnl|LJGI|TC71577 similar to UniRef100_A7PJE3 Cluster: Chromosome... 165 1e-39
gnl|LJGI|BP074682 weakly similar to UniRef100_A7PJE3 Cluster: Ch... 161 2e-38
>gnl|LJGI|TC67348 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1147
Score = 1148 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 1181 tatttgaggaaagatgggctataattgagtcaaattacaatcgggagttgagatatggct 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttgaggaaagatgggctataattgagtcaaattacaatcgggagttgagatatggct 60
Query: 1241 tagaatatggggcagctattcctgcaacttcacctctgtctagaaaggctcatgcattcc 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaatatggggcagctattcctgcaacttcacctctgtctagaaaggctcatgcattcc 120
Query: 1301 gaccaccccctcttgatatgagacggattttggataggtcagagtcaatgacgcaacctt 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccaccccctcttgatatgagacggattttggataggtcagagtcaatgacgcaacctt 180
Query: 1361 caaaacttatgaacgtcactccttcatcccgaacccctgctctgaagaagccaaaggcaa 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaacttatgaacgtcactccttcatcccgaacccctgctctgaagaagccaaaggcaa 240
Query: 1421 gagatctttataagagagacatgacatatgaggaaaagcagaaacttagcacacatcttc 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagatctttataagagagacatgacatatgaggaaaagcagaaacttagcacacatcttc 300
Query: 1481 agagtcttccttctgagaagctagatgccatcgtacagatcattaaaaagagaaattcag 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagtcttccttctgagaagctagatgccatcgtacagatcattaaaaagagaaattcag 360
Query: 1541 cactttcccaacatgatgatgaaattgaagttgatattgatagtgtggataatgaaactc 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cactttcccaacatgatgatgaaattgaagttgatattgatagtgtggataatgaaactc 420
Query: 1601 tttgggagcttgatagatttgtgaccaactttaagaaaagtttgagcaagaacaagagaa 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttgggagcttgatagatttgtgaccaactttaagaaaagtttgagcaagaacaagagaa 480
Query: 1661 aggctgaacttgctattgaagctagagcacgagctgagcaaacttccaacaagaagagtc 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggctgaacttgctattgaagctagagcacgagctgagcaaacttccaacaagaagagtc 540
Query: 1721 tggcaccatttgtcgaggtccagagagaaacacaagcag 1759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggcaccatttgtcgaggtccagagagaaacacaagcag 579
>gnl|LJGI|TC71957 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 600
Score = 880 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1 atggcttcggaatctgtagttggtgatgatggacctagagagaagcagagatacgcggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atggcttcggaatctgtagttggtgatgatggacctagagagaagcagagatacgcggag 216
Query: 61 agcaaggtgtacaccagaaaagcctttaaaggtttgaagaacagaggcaacggtgttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agcaaggtgtacaccagaaaagcctttaaaggtttgaagaacagaggcaacggtgttact 276
Query: 121 gttcctcctcctccgcctcctgctaccaccgtgactacaactgccagctcagctactgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gttcctcctcctccgcctcctgctaccaccgtgactacaactgccagctcagctactgtg 336
Query: 181 actgctgttagcaataacggtaattgcaatggtactgttgagaaacgtgatgacaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 actgctgttagcaataacggtaattgcaatggtactgttgagaaacgtgatgacaaggcc 396
Query: 241 aaggatagctgcaacgagggctcggttcagctgccggcgccggaggatgggagtgcggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaggatagctgcaacgagggctcggttcagctgccggcgccggaggatgggagtgcggtt 456
Query: 301 cagccggttgtgagtttgaggttggatgtggtttcggatgacttgacaagcttgaatcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cagccggttgtgagtttgaggttggatgtggtttcggatgacttgacaagcttgaatcgt 516
Query: 361 cggcaggatgagccgccgagcgtcgatgttgggcagaaggatgttcctggcttgcgagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cggcaggatgagccgccgagcgtcgatgttgggcagaaggatgttcctggcttgcgagaa 576
Query: 421 ttgggttcggagcaggggccggag 444
||||||||||||||||||||||||
Sbjct: 577 ttgggttcggagcaggggccggag 600
>gnl|LJGI|BW616918 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 477
Score = 492 bits (248), Expect = e-138
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 atggcttcggaatctgtagttggtgatgatggacctagagagaagcagagatacgcggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atggcttcggaatctgtagttggtgatgatggacctagagagaagcagagatacgcggag 289
Query: 61 agcaaggtgtacaccagaaaagcctttaaaggtttgaagaacagaggcaacggtgttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agcaaggtgtacaccagaaaagcctttaaaggtttgaagaacagaggcaacggtgttact 349
Query: 121 gttcctcctcctccgcctcctgctaccaccgtgactacaactgccagctcagctactgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gttcctcctcctccgcctcctgctaccaccgtgactacaactgccagctcagctactgtg 409
Query: 181 actgctgttagcaataacggtaattgcaatggtactgttgagaaacgtgatgacaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 actgctgttagcaataacggtaattgcaatggtactgttgagaaacgtgatgacaaggcc 469
Query: 241 aaggatag 248
||||||||
Sbjct: 470 aaggatag 477
>gnl|LJGI|TC80307 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 691
Score = 414 bits (209), Expect = e-115
Identities = 502/597 (84%), Gaps = 2/597 (0%)
Strand = Plus / Plus
Query: 736 gagaaggagaagagaacgcctaaggcgaaccagttttatcgcaattcggagttcttgctt 795
||||||||||||||||||||||| || ||||| ||||||| || || ||||||||||||
Sbjct: 95 gagaaggagaagagaacgcctaaagccaaccacttttatcataactcagagttcttgctt 154
Query: 796 gcgaaagataaatttccacctgcagagagtaacaagaagtccaaatcgagtggaaagaag 855
||||||||||||||||||||||||||||||||||||||||| |||| | | | ||||||
Sbjct: 155 gcgaaagataaatttccacctgcagagagtaacaagaagtcgaaattgcattggaagaag 214
Query: 856 catggtgggggagaaatgagacacgcgcttgtgatggaatccaagtattccaagagctgt 915
|| |||| |||||| | |||| | ||| ||||| ||| |||| || ||||||||||
Sbjct: 215 caaggtgctggagaattcggacatggtcttcggatgggatctaagtttttcaagagctgt 274
Query: 916 agctcattgctggagaagttgatgaaacacaag-catggttgggtgtttaattctccagt 974
|| ||| | || || ||| | ||||| |||||| | |||||||||||||||| |||| ||
Sbjct: 275 agttcactacttgaaaagcttatgaagcacaagtcttggttgggtgtttaatactcctgt 334
Query: 975 tgatgctgaggctcttggtctgcatgattattttactattatcacacatccaatggactt 1034
||||| ||||| ||||||| ||||||||||||||||||| || || || |||||||||||
Sbjct: 335 tgatgttgagggtcttggtttgcatgattattttactatcattactcacccaatggactt 394
Query: 1035 gggtactgtgaagtcaagactgaacagtaact-ggtacaaatcacccaaggagtttgctg 1093
||| ||||||||| |||| ||||||| |||| ||||||||||||| ||||| ||||| |
Sbjct: 395 gggaactgtgaagacaaggctgaacaaaaacttggtacaaatcaccaaaggaatttgcag 454
Query: 1094 aggatgtaagacttacatttcataatgccatgacatataatcctaaagggcaagatgttc 1153
||||||| ||||| || |||| |||||| |||||||||||||| | || ||||||||||
Sbjct: 455 aggatgtgagactcacttttcgtaatgctatgacatataatccggagggacaagatgttc 514
Query: 1154 atgtaatggcagagcagctttcagaattatttgaggaaagatgggctataattgagtcaa 1213
||||||||||||| ||| | ||| | |||||||||| |||||||||||||| ||||||
Sbjct: 515 atgtaatggcagaacagttatcaaagatatttgaggacagatgggctataatagagtcag 574
Query: 1214 attacaatcgggagttgagatatggcttagaatatggggcagctattcctgcaacttcac 1273
|||||||||| ||| |||||||||| || ||||||| ||| |||||| ||||||
Sbjct: 575 attacaatcgtgagatgagatatggtgtaagttatggggtagcaccccctgcaccttcac 634
Query: 1274 ctctgtctagaaaggctcatgcattccgaccaccccctcttgatatgagacggattt 1330
||||||||||||||| || |||||| | || || ||||||||||||||| ||||||
Sbjct: 635 ctctgtctagaaaggttcctgcatttcctcccccgcctcttgatatgagaaggattt 691
>gnl|LJGI|TC71577 similar to UniRef100_A7PJE3 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 900
Score = 165 bits (83), Expect = 1e-39
Identities = 191/227 (84%)
Strand = Plus / Plus
Query: 1448 atgaggaaaagcagaaacttagcacacatcttcagagtcttccttctgagaagctagatg 1507
||||||||||||| || || |||||| | || |||||| | ||| | |||||||| ||||
Sbjct: 2 atgaggaaaagcaaaagctaagcacaaacctacagagtttacctccagagaagctggatg 61
Query: 1508 ccatcgtacagatcattaaaaagagaaattcagcactttcccaacatgatgatgaaattg 1567
| || || || |||||||| | ||||| || ||||||| |||||||||||||||||||
Sbjct: 62 ctattgtgcaaatcattaagaggagaagtttagcacttagtcaacatgatgatgaaattg 121
Query: 1568 aagttgatattgatagtgtggataatgaaactctttgggagcttgatagatttgtgacca 1627
|||| || ||||||||||| ||| ||| ||||| ||||| || |||||||||||||| |
Sbjct: 122 aagtggacattgatagtgtagatgctgagactctctgggaactcgatagatttgtgacta 181
Query: 1628 actttaagaaaagtttgagcaagaacaagagaaaggctgaacttgct 1674
||| |||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 182 actataagaaaagtttaagcaaaaacaagaggaaggctgaacttgct 228
>gnl|LJGI|BP074682 weakly similar to UniRef100_A7PJE3 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 484
Score = 161 bits (81), Expect = 2e-38
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1675 attgaagctagagcacgagctgagcaaacttccaacaagaagagtctggcaccatttgtc 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaagctagagcacgagctgagcaaacttccaacaagaagagtctggcaccatttgtc 60
Query: 1735 gaggtccagagagaaacacaagcag 1759
||||||||||||||||||| |||||
Sbjct: 61 gaggtccagagagaaacacgagcag 85