Miyakogusa Predicted Gene

Lj3g3v2838590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2838590.1 Non Chatacterized Hit- tr|I3T190|I3T190_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,51.49,2e-17,seg,NULL,CUFF.44768.1
         (973 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62714 weakly similar to UniRef100_A1DI68 Cluster: Syb...   111   8e-24
gnl|LJGI|AV768784                                                      76   5e-13

>gnl|LJGI|TC62714 weakly similar to UniRef100_A1DI68 Cluster: Sybindin-like family
            protein; n=1; Neosartorya fischeri NRRL 181|Rep:
            Sybindin-like family protein - Neosartorya fischeri
            (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
            fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)),
            partial (11%)
          Length = 2143

 Score =  111 bits (56), Expect = 8e-24
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                        
Query: 688  aggttgaaggagatgctggtgaaggaagataagttgtcaacggcgttgaccttctccagt 747
            ||||||||||| |||||||||||||||||| | |||||| | | |||||||  |||||| 
Sbjct: 962  aggttgaaggacatgctggtgaaggaagatgaattgtcagcagtgttgaccaactccaga 1021

                                                
Query: 748  ctaacttctctccaagagatcatcaacaacttctcc 783
            ||||||||||||||||| ||||||||||||||||||
Sbjct: 1022 ctaacttctctccaagaaatcatcaacaacttctcc 1057



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 109  aactccagactaacatttctccaagagatcatcaacagcttct 151
            |||||||||||||| | ||||||||| |||||||||| |||||
Sbjct: 1013 aactccagactaacttctctccaagaaatcatcaacaacttct 1055


>gnl|LJGI|AV768784 
          Length = 435

 Score = 75.8 bits (38), Expect = 5e-13
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 740 tctccagtctaacttctctccaagagatcatcaacaacttctccga 785
           ||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 339 tctccagactaacttctttccaagagatcatcaacaacttctccga 294