Miyakogusa Predicted Gene
- Lj3g3v2838560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2838560.1 Non Chatacterized Hit- tr|I1M3N4|I1M3N4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37735
PE,75.56,0,TCP,Transcription factor TCP subgroup; seg,NULL;
TCP,Transcription factor, TCP,CUFF.44766.1
(1021 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66527 similar to UniRef100_A7PJE1 Cluster: Chromosome... 846 0.0
gnl|LJGI|TC71435 homologue to UniRef100_A7PJE1 Cluster: Chromoso... 579 e-164
gnl|LJGI|AV424228 similar to UniRef100_A2I5C7 Cluster: Lanceolat... 178 4e-44
>gnl|LJGI|TC66527 similar to UniRef100_A7PJE1 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 971
Score = 846 bits (427), Expect = 0.0
Identities = 440/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 580 cacgcacaatctcaaacaggtggtgggcaaacttccagtgaccaaacccttttctctggc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cacgcacaatctcaaacaggtggtgggcaaacttccagtgaccaaacccttttctctggc 62
Query: 640 tcaactccctctgggtttgacaccaattatcacaggattgttacatggaacaatgattca 699
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63 tcaactccctctgggtttgacaccaattatcacaggattgttgcatggaacaatgattca 122
Query: 700 accaccactgacatgaacagaggtgggttcatggtgaattcaccagcaattctaggccat 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 accaccactgacatgaacagaggtgggttcatggtgaattcaccagcaattctaggccat 182
Query: 760 ggtacttctgcttattcccacagggggacccttcagtccag-tttttcaccatcacttcg 818
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 183 ggtacttctgcttattcccacagggggacccttcagtccagttttttcaccatcacttcg 242
Query: 819 tccttggaatgagattccaatggcttcctcagataatcacaatcacaaggcaattcacca 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tccttggaatgagattccaatggcttcctcagataatcacaatcacaaggcaattcacca 302
Query: 879 ggcttcaatctttggcagcaggtttctctctgatgcaatacctgggttctgcattccagc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggcttcaatctttggcagcaggtttctctctgatgcaatacctgggttctgcattccagc 362
Query: 939 taggattcaaggagaggatgagagccatggagtttcttctgacaggccatcctctccttc 998
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 taggattcaaggagaggatgagagccatggagtttcttttgacaggccatcctctccttc 422
Query: 999 acctaactctcatcatcactgac 1021
|||||||||||||||||||||||
Sbjct: 423 acctaactctcatcatcactgac 445
>gnl|LJGI|TC71435 homologue to UniRef100_A7PJE1 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 823
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 atgagaatgaagagcactgggggagaaattattcatgttgaaggaggccacattgttcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atgagaatgaagagcactgggggagaaattattcatgttgaaggaggccacattgttcga 591
Query: 61 tccacaggtagaaaagatcggcatagcaaggtttacacttcaaaaggtcctcgtgaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tccacaggtagaaaagatcggcatagcaaggtttacacttcaaaaggtcctcgtgaccgc 651
Query: 121 agggttcggctatcagcacacaccgccattcaattctacgacgttcaagaccgtctcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agggttcggctatcagcacacaccgccattcaattctacgacgttcaagaccgtctcggc 711
Query: 181 tacgaccgaccgagcaaggccgtcgactggctcatcaagaaggcgaagtccgccattgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tacgaccgaccgagcaaggccgtcgactggctcatcaagaaggcgaagtccgccattgac 771
Query: 241 aagcttgctgagcttcctccatggcaaccaccttctaatcttgaacaagtcc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aagcttgctgagcttcctccatggcaaccaccttctaatcttgaacaagtcc 823
>gnl|LJGI|AV424228 similar to UniRef100_A2I5C7 Cluster: Lanceolate; n=1; Solanum
lycopersicum|Rep: Lanceolate - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (20%)
Length = 323
Score = 178 bits (90), Expect = 4e-44
Identities = 159/182 (87%)
Strand = Plus / Minus
Query: 40 gaaggaggccacattgttcgatccacaggtagaaaagatcggcatagcaaggtttacact 99
|||||||| ||| |||| ||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 284 gaaggaggacactttgtgcgatccacaggtagaaaagatcgacacagcaaggttcacact 225
Query: 100 tcaaaaggtcctcgtgaccgcagggttcggctatcagcacacaccgccattcaattctac 159
|||||||| ||||| || ||||||||||||||| |||| ||||| |||||| | |||||
Sbjct: 224 tcaaaaggccctcgcgatcgcagggttcggctagcagctcacacagccattgagttctat 165
Query: 160 gacgttcaagaccgtctcggctacgaccgaccgagcaaggccgtcgactggctcatcaag 219
|| ||||||||||| || |||||||||||||| |||||||| | || ||||||||||||
Sbjct: 164 gatgttcaagaccgcctaggctacgaccgacccagcaaggctatggattggctcatcaag 105
Query: 220 aa 221
||
Sbjct: 104 aa 103