Miyakogusa Predicted Gene
- Lj3g3v2835370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2835370.1 Non Chatacterized Hit- tr|I1K2J0|I1K2J0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.57,5e-19,C2H2 and
C2HC zinc fingers,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finge,CUFF.44752.1
(708 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82088 similar to UniRef100_A7PIQ2 Cluster: Chromosome... 424 e-118
gnl|LJGI|DC599346 similar to UniRef100_Q0DJG4 Cluster: Os05g0286... 373 e-102
gnl|LJGI|DC599673 similar to UniRef100_A7PNR8 Cluster: Chromosom... 52 5e-06
>gnl|LJGI|TC82088 similar to UniRef100_A7PIQ2 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 455
Score = 424 bits (214), Expect = e-118
Identities = 217/218 (99%)
Strand = Plus / Plus
Query: 491 attctgtttttagcaaaaaagtggcaactgattcatgtggagagcttgaagaaatcagtt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctgtttttagcaaaaaagtggcaactgattcatgtggagagcttgaagaaatcagtt 60
Query: 551 ataaaagaccaaagatttctattcctgtcatcctcaagccatgttcaaatgatagaggac 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaaagaccaaagatttctattcctgtcatcctcaagccatgttcaaatgatagaggac 120
Query: 611 taacattccaatctgcagaatttgtacttggacttaagcctggaatggaagacttggatc 670
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taacattcccatctgcagaatttgtacttggacttaagcctggaatggaagacttggatc 180
Query: 671 ttgaactcaggttggggaaacctcagaaagtttagtaa 708
||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaactcaggttggggaaacctcagaaagtttagtaa 218
>gnl|LJGI|DC599346 similar to UniRef100_Q0DJG4 Cluster: Os05g0286100 protein; n=2;
Oryza sativa|Rep: Os05g0286100 protein - Oryza sativa
subsp., partial (8%)
Length = 392
Score = 373 bits (188), Expect = e-102
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 1 atggaggaaattactactcatgagtacttgatgtggatgaagagaaagcaaatattgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atggaggaaattactactcatgagtacttgatgtggatgaagagaaagcaaatattgaag 264
Query: 61 tcacatattcaagcaccaatatttgcagcctgcaacaacaactcttgggaggaaagggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacatattcaagcaccaatatttgcagcctgcaacaacaactcttgggaggaaagggct 324
Query: 121 tttgcagaagatgcagctaggatacttggtgggtgcatgtggcctccaagatcttactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgcagaagatgcagctaggatacttggtgggtgcatgtggcctccaagatcttactca 384
Query: 181 tgtcactt 188
||||||||
Sbjct: 385 tgtcactt 392
>gnl|LJGI|DC599673 similar to UniRef100_A7PNR8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 565
Score = 52.0 bits (26), Expect = 5e-06
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 146 ttggtgggtgcatgtggcctccaagatcttactcatgtcacttctgtaaaagagagttca 205
||||||| |||| ||||| |||||||| ||||| || |||||| | ||||||||||
Sbjct: 283 ttggtggctgcacatggccaccaagatcatactcttgcagcttctgcaggagagagttca 342
Query: 206 ggtctgctcaagctcttgggggccacatgaatgt 239
|||| || || ||||| || ||||||||||||||
Sbjct: 343 ggtcagcacaggctctaggtggccacatgaatgt 376