Miyakogusa Predicted Gene
- Lj3g3v2824300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2824300.1 Non Chatacterized Hit- tr|I1M3P4|I1M3P4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40146
PE,72.39,0,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; seg,NULL;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; C2H2 and C2HC ,CUFF.44745.1
(1428 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61694 1403 0.0
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 129 5e-29
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 123 3e-27
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 103 3e-21
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 84 3e-15
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 78 2e-13
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 70 4e-11
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 68 2e-10
gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosom... 60 4e-08
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 54 2e-06
>gnl|LJGI|TC61694
Length = 795
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 721 gaaacaggtaacaacaatcatcaaacacctagagggctatccctttggatgactcagcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaacaggtaacaacaatcatcaaacacctagagggctatccctttggatgactcagcct 61
Query: 781 caaacatctcaccctcatgaaacaatgtcggccagtacccatatgcatcatgagattcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caaacatctcaccctcatgaaacaatgtcggccagtacccatatgcatcatgagattcat 121
Query: 841 aatcatcatcttgggacaaccacaaatcaaggaccaatatacagtgttggaaatggaaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatcatcatcttgggacaaccacaaatcaaggaccaatatacagtgttggaaatggaaat 181
Query: 901 ccaccaccaccaccctctaattatcagctaaattgggtgtttgggaataagttttcttcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccaccaccaccaccctctaattatcagctaaattgggtgtttgggaataagttttcttcc 241
Query: 961 aatggaaatcatcaagagctaactagtacaacttcacttccactagtgaataacaacaac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aatggaaatcatcaagagctaactagtacaacttcacttccactagtgaataacaacaac 301
Query: 1021 attgtaaatgatggtgcacacaacctcatcagtgttccttccttgtatagctcccaacaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 attgtaaatgatggtgcacacaacctcatcagtgttccttccttgtatagctcccaacaa 361
Query: 1081 caacaccaatcccatcaaacaagtgcatcagctaacatgtctgccacagctttgttgcaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caacaccaatcccatcaaacaagtgcatcagctaacatgtctgccacagctttgttgcaa 421
Query: 1141 aaagctgctcaaattggaacaacttcctcaactgatccatcattccttgggagcttagga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaagctgctcaaattggaacaacttcctcaactgatccatcattccttgggagcttagga 481
Query: 1201 ttgagatcatgcaacagtccaaggcaagatcatgggaacagcaacaaattctgtggaatg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgagatcatgcaacagtccaaggcaagatcatgggaacagcaacaaattctgtggaatg 541
Query: 1261 tactcttccagttcagtggtcaccacaagtcatggctgtgagacagagaactattcagat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tactcttccagttcagtggtcaccacaagtcatggctgtgagacagagaactattcagat 601
Query: 1321 gatttgtcgcaaatgccccctgcgaaacgacgccatgtgcaaagcgaagagagtgcttgg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gatttgtcgcaaatgccccctgcgaaacgacgccatgtgcaaagcgaagagagtgcttgg 661
Query: 1381 ggacaaactagggattttcttggtgttggagtggcgaaccatttgccg 1428
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggacaaactagggattttcttggtgttggagtggcgaaccatttgccg 709
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 129 bits (65), Expect = 5e-29
Identities = 377/481 (78%)
Strand = Plus / Plus
Query: 97 aagaggaagagaaacctccctggaaacccagatcctgaagctgaagtgatagccttatca 156
|||| |||| |||||||||| |||| |||||||| || || || ||||| || | |||
Sbjct: 125 aagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgattgctctgtca 184
Query: 157 ccaaagactctgatggccaccaacagattcgtgtgtgagatttgtctaaagggtttccaa 216
|| ||||| |||||||| || |||||||| || ||||| || || ||||| || ||
Sbjct: 185 ccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaaggggtttcag 244
Query: 217 agggatcagaatctccaactgcaccgacgcggccataaccttccatggaagctcaagcag 276
|||||||||||||| || || || ||||| || || || || ||||||||||| | ||||
Sbjct: 245 agggatcagaatcttcagctccatcgacgggggcacaatctgccatggaagctgaggcag 304
Query: 277 aggacaagcaaagaagtgaggaagagagtttacgtgtgcccggagaagacgtgcgtccac 336
||| ||||||| || ||||||||||| || || || || || || |||||| | ||
Sbjct: 305 aggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacgtgtgctcat 364
Query: 337 catcacccttcaagggctctgggggacttaactgggatcaagaagcacttctgcaggaag 396
|| | ||||| || ||| |||| || | || ||||| |||||||| |||||||| ||
Sbjct: 365 cacgatccttctagagctttgggtgatctcacggggattaagaagcatttctgcagaaaa 424
Query: 397 caaggggagaagaagtggaagtgcgagaagtgctcaaagcgttatgctgtgcagtcagac 456
|| || |||||||||||||| || || |||||||| ||| ||||| || || || ||
Sbjct: 425 catggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcggat 484
Query: 457 tggaaagcacattcgaagacctgtgggactagagaatacaaatgtgactgtgggactgta 516
|||||||| || || |||| || || || ||||| || ||||| || ||||| ||| |
Sbjct: 485 tggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgtggaactttg 544
Query: 517 ttttcaaggagggatagcttcatcactcacagggccttctgtgatgccttagcagaggaa 576
|||||||||||||||||||||||||| || ||||| || |||||||| ||||||||||||
Sbjct: 545 ttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgcgttagcagaggaa 604
Query: 577 a 577
|
Sbjct: 605 a 605
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 123 bits (62), Expect = 3e-27
Identities = 370/470 (78%), Gaps = 2/470 (0%)
Strand = Plus / Plus
Query: 107 gaaacctccctggaaacccagatcctgaagctgaagtgatagccttatcaccaaagactc 166
||||||| ||||||| |||||||| ||||| || ||||| || | ||||| |||||||
Sbjct: 198 gaaaccttcctggaatgccagatccagaagcagaggtgattgctctgtcaccgaagactc 257
Query: 167 tgatggccaccaacagattcgtgtgtgagatttgtct-aaagggtttccaaagggatcag 225
| ||||| || ||||||||||| || || ||||| |||||||||| | ||||| |||
Sbjct: 258 taatggcgacgaacagattcgtatgcgaaatttgcaacaaagggtttc-agagggaccag 316
Query: 226 aatctccaactgcaccgacgcggccataaccttccatggaagctcaagcagaggacaagc 285
||||| || || ||||| | || || || || ||||||||||| | ||||||||| |||
Sbjct: 317 aatctgcagcttcaccggagaggtcacaatctgccatggaagctgaggcagaggacgagc 376
Query: 286 aaagaagtgaggaagagagtttacgtgtgcccggagaagacgtgcgtccaccatcaccct 345
|| || ||||||||||| || || || |||||||| ||||| ||||||||| |||||
Sbjct: 377 aaggaggtgaggaagagggtgtatgtctgcccggaaccaacgtgtgtccaccatgaccct 436
Query: 346 tcaagggctctgggggacttaactgggatcaagaagcacttctgcaggaagcaaggggag 405
|| | || |||| || | || || || || |||||||||||||| ||||| || |||
Sbjct: 437 tctcgagcgttgggtgatctcaccggaattaaaaagcacttctgcagaaagcacggtgag 496
Query: 406 aagaagtggaagtgcgagaagtgctcaaagcgttatgctgtgcagtcagactggaaagca 465
||||||||||| |||||||| ||||| ||| ||||| || || || || ||||||||
Sbjct: 497 aagaagtggaaatgcgagaaatgctccaagaaatatgcagttcaatctgattggaaagct 556
Query: 466 cattcgaagacctgtgggactagagaatacaaatgtgactgtgggactgtattttcaagg 525
|| || ||| || || || ||||| || ||||||||||| || || || ||||| |||
Sbjct: 557 cactccaaggtttgcggtaccagagagtataaatgtgactgcggcacggtgttttcgagg 616
Query: 526 agggatagcttcatcactcacagggccttctgtgatgccttagcagagga 575
|||||||||||||| ||||| || || || || ||||| || ||||||||
Sbjct: 617 agggatagcttcattactcatagagctttttgcgatgcgttggcagagga 666
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 103 bits (52), Expect = 3e-21
Identities = 178/220 (80%)
Strand = Plus / Plus
Query: 290 aagtgaggaagagagtttacgtgtgcccggagaagacgtgcgtccaccatcacccttcaa 349
|||||||||||| |||||||||||||| ||||||| || |||||||| ||||| |
Sbjct: 261 aagtgaggaagaaggtttacgtgtgcccagagaagagttgtgtccaccacgaccctagta 320
Query: 350 gggctctgggggacttaactgggatcaagaagcacttctgcaggaagcaaggggagaaga 409
| || || || ||||| || || |||||||| |||||| |||| || || || |||||||
Sbjct: 321 gagcacttggagacttgacaggaatcaagaaacacttcagcagaaaacatggtgagaaga 380
Query: 410 agtggaagtgcgagaagtgctcaaagcgttatgctgtgcagtcagactggaaagcacatt 469
|||||||||| ||||||||||| ||| || ||||| || || || ||||| || |||
Sbjct: 381 agtggaagtgtgagaagtgctccaagaaatacgctgttcattccgattggaaggcccatg 440
Query: 470 cgaagacctgtgggactagagaatacaaatgtgactgtgg 509
| |||| |||||||||||||| ||||| |||||||||||
Sbjct: 441 ccaagatttgtgggactagagagtacaagtgtgactgtgg 480
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 83.8 bits (42), Expect = 3e-15
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 380 agcacttctgcaggaagcaaggggagaagaagtggaagtgcgagaagtgctcaaagcgtt 439
||||||| | ||| ||||| || |||||||||||||| || || |||||||| ||| |
Sbjct: 1 agcacttttccagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagt 60
Query: 440 atgctgtgcagtcagactggaaagcacattcgaagacctgtgggactagagaatacaaat 499
|||| || || |||||||||||||| || || || |||||||| || |||||||||| ||
Sbjct: 61 atgcagttcaatcagactggaaagctcactccaaaacctgtggtacaagagaatacagat 120
Query: 500 gtgactgtgg 509
||||||||||
Sbjct: 121 gtgactgtgg 130
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 77.8 bits (39), Expect = 2e-13
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 373 atcaagaagcacttctgcaggaagcaaggggagaagaagtggaagtgcgagaagtgctc 431
||||||||||||||| |||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 261 atcaagaagcacttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctc 203
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 69.9 bits (35), Expect = 4e-11
Identities = 172/215 (80%), Gaps = 2/215 (0%)
Strand = Plus / Plus
Query: 107 gaaacctccctggaaacccagatcctgaagctgaagtgatagccttatcaccaaagactc 166
||||||| ||||||| |||||||| ||||| || ||||| || | ||||| |||||||
Sbjct: 218 gaaaccttcctggaatgccagatccagaagcagaggtgattgctctgtcaccgaagactc 277
Query: 167 tgatggccaccaacagattcgtgtgtgagatttg-tctaaagggtttccaaagggatcag 225
| ||||| || ||||||||||| || || ||||| ||||||||| || ||||| |||
Sbjct: 278 taatggcgacgaacagattcgtatgcgaaatttgcaacaaagggttt-cagagggaccag 336
Query: 226 aatctccaactgcaccgacgcggccataaccttccatggaagctcaagcagaggacaagc 285
||||| || || ||||| | || || || || ||||||||||| | ||||||||| |||
Sbjct: 337 aatctgcagcttcaccggagaggtcacaatctgccatggaagctgaggcagaggacgagc 396
Query: 286 aaagaagtgaggaagagagtttacgtgtgcccgga 320
|| || ||||||||||| || || || ||||||||
Sbjct: 397 aaggaggtgaggaagagggtgtatgtctgcccgga 431
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 67.9 bits (34), Expect = 2e-10
Identities = 109/134 (81%)
Strand = Plus / Plus
Query: 97 aagaggaagagaaacctccctggaaacccagatcctgaagctgaagtgatagccttatca 156
||||| ||||||||||||||||| |||||||| || ||||||||||| | ||| | ||
Sbjct: 626 aagagaaagagaaacctccctggcaacccagacccagaagctgaagttgtggccatgtct 685
Query: 157 ccaaagactctgatggccaccaacagattcgtgtgtgagatttgtctaaagggtttccaa 216
|||||| |||| ||||| || ||||| ||| | |||||||| || || || ||||||
Sbjct: 686 ccaaagtctcttatggcaacaaacaggttcttatgtgagatctgcaacaaaggattccaa 745
Query: 217 agggatcagaatct 230
|| |||||||||||
Sbjct: 746 agagatcagaatct 759
>gnl|LJGI|GO019772 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 618
Score = 60.0 bits (30), Expect = 4e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 487 agagaatacaaatgtgactgtgggactgtattttcaaggagggatagcttcatcactcac 546
|||||||| | |||||| ||||| || | || |||||| | ||||| |||||||||||
Sbjct: 287 agagaatatagatgtgattgtggcaccctcttctcaaggcgtgatagtttcatcactcat 346
Query: 547 agggccttctgtgatgcc 564
||||||||||||||||||
Sbjct: 347 agggccttctgtgatgcc 364
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 54.0 bits (27), Expect = 2e-06
Identities = 150/191 (78%)
Strand = Plus / Plus
Query: 367 actgggatcaagaagcacttctgcaggaagcaaggggagaagaagtggaagtgcgagaag 426
||||| || ||||||||||||||||| ||||| || ||||| || ||||| || || |||
Sbjct: 712 actggcattaagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgacaag 771
Query: 427 tgctcaaagcgttatgctgtgcagtcagactggaaagcacattcgaagacctgtgggact 486
||||| ||| || ||||| || || ||||||| |||||| || || | ||||| ||
Sbjct: 772 tgctccaagaagtacgctgttcaatctgactggagagcacactccaaaatatgtggcacg 831
Query: 487 agagaatacaaatgtgactgtgggactgtattttcaaggagggatagcttcatcactcac 546
| ||||| || ||||||||||| || | ||||| || || ||||| |||||||| |||
Sbjct: 832 aaggaatataagtgtgactgtggaaccatcttttccagaagagatagtttcatcacccac 891
Query: 547 agggccttctg 557
|| || |||||
Sbjct: 892 agagctttctg 902