Miyakogusa Predicted Gene

Lj3g3v2809260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2809260.1 tr|G7JSU8|G7JSU8_MEDTR Callose synthase
OS=Medicago truncatula GN=MTR_4g078220 PE=4
SV=1,84.09,0,Glucan_synthase,Glycosyl transferase, family 48;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAME,CUFF.44669.1
         (2509 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosy...    56   1e-06

>gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosyl transferase, family
            48; n=1; Medicago truncatula|Rep: Glycosyl transferase,
            family 48 - Medicago truncatula (Barrel medic), partial
            (15%)
          Length = 563

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 100/124 (80%)
 Strand = Plus / Plus

                                                                        
Query: 2285 taagtgaggacatttttgctggctttaactgtactcttcgcggaggtaatgtcacacacc 2344
            ||||||| || |||||||||||||| |||| ||| || || | ||| ||||| || || |
Sbjct: 244  taagtgaagatatttttgctggcttcaactctacactccgggaaggaaatgttacccatc 303

                                                                        
Query: 2345 atgaatacattcaagttgggaaaggaagggatgttgggttgaatcaaatatcaatgtttg 2404
            |||| ||||| || |||||||| ||||| ||||| ||  | || ||||| || |||||||
Sbjct: 304  atgagtacatacaggttgggaagggaagagatgtgggtctcaaccaaatttctatgtttg 363

                
Query: 2405 aagc 2408
            ||||
Sbjct: 364  aagc 367