Miyakogusa Predicted Gene
- Lj3g3v2809210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2809210.1 tr|F2E1F5|F2E1F5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,36.25,4e-18,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; DUF1421,Protein of
unknown function DUF14,CUFF.44732.1
(847 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72176 similar to UniRef100_A7PJ36 Cluster: Chromosome... 1084 0.0
gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted ... 626 e-179
gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome... 82 6e-15
>gnl|LJGI|TC72176 similar to UniRef100_A7PJ36 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 838
Score = 1084 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus
Query: 301 gaaacactgcctaatagcttgccaatgcaaatgcaatattcagggattccaccctcagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaacactgcctaatagcttgccaatgcaaatgcaatattcagggattccaccctcagga 61
Query: 361 tccggccgcggtgctgccacgccttatggatataatggcaccggtaggagtacagttgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tccggccgcggtgctgccacgccttatggatataatggcaccggtaggagtacagttgca 121
Query: 421 cagcaacctccgccccagcaaatcaagagctcttttccagcacaaccaggggatatgtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagcaacctccgccccagcaaatcaagagctcttttccagcacaaccaggggatatgtat 181
Query: 481 ggaacccatgccacgcctcctcctgctagttcatacatgacgtatgattctgacggtggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggaacccatgccacgcctcctcctgctagttcatacatgacgtatgattctgacggtggc 241
Query: 541 agagcacattatacagcccaacattcttctcattatgctcaagctggataccctcccaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agagcacattatacagcccaacattcttctcattatgctcaagctggataccctcccaca 301
Query: 601 agtgcttcccttcagaaccctgcaccccataatctcatggtccggaatcctagccagccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtgcttcccttcagaaccctgcaccccataatctcatggtccggaatcctagccagccg 361
Query: 661 ccgcaattcacacggagccatccctacaatgatctgattgaaaagttggtgaacatggga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgcaattcacacggagccatccctacaatgatctgattgaaaagttggtgaacatggga 421
Query: 721 ttcagaggcgatcatgtaggaagtgttatccagaggatggaggaaacagggcagcctgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcagaggcgatcatgtaggaagtgttatccagaggatggaggaaacagggcagcctgta 481
Query: 781 gattttaactcgttacttgaccgtttgaatgtacttagttcagtaggtccccagagggga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gattttaactcgttacttgaccgtttgaatgtacttagttcagtaggtccccagagggga 541
Query: 841 tggtaag 847
|||||||
Sbjct: 542 tggtaag 548
>gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich protein;
n=1; Arabidopsis thaliana|Rep: Predicted proline-rich
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(35%)
Length = 1361
Score = 626 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Plus
Query: 1 atgttgcccgcctctttgcccaatccaccagccatgacccactttccccagaatcagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 atgttgcccgcctctttgcccaatccaccagccatgacccactttccccagaatcagtat 1105
Query: 61 ctgtcttctgatccgcggtaccagaatccacaaccaacatcatctcaggtaaccatgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ctgtcttctgatccgcggtaccagaatccacaaccaacatcatctcaggtaaccatgtcc 1165
Query: 121 ccgcctgtacaacagttttctcagtatcagcagcagccacagcaacagcattggcctcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 ccgcctgtacaacagttttctcagtatcagcagcagccacagcaacagcattggcctcaa 1225
Query: 181 caatcacctcaggaggttgcacctccgcaaccaccctcaatgcagtttcaaatgagaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 caatcacctcaggaggttgcacctccgcaaccaccctcaatgcagtttcaaatgagaccc 1285
Query: 241 tcatcaactaatacttacactccatatcctacaagccaagctgcaaatccacctcccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 tcatcaactaatacttacactccatatcctacaagccaagctgcaaatccacctcccaaa 1345
Query: 301 gaaacactgcctaata 316
||||||||||||||||
Sbjct: 1346 gaaacactgcctaata 1361
>gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1413
Score = 81.8 bits (41), Expect = 6e-15
Identities = 304/391 (77%), Gaps = 18/391 (4%)
Strand = Plus / Plus
Query: 413 cagttgcacagcaacctccgccccagcaaatcaagagctcttttccagcacaaccagggg 472
||||| ||||||||||||| || |||||||||||||| ||||| || ||||||||||| |
Sbjct: 653 cagttccacagcaacctccaccacagcaaatcaagagttctttccctgcacaaccaggtg 712
Query: 473 atatgtatggaacccatg----ccacgc--------ctcctcctgctagttcatacatga 520
| |||||||||| || |||| | ||||||||| | | |||||||||
Sbjct: 713 acatgtatggaaatagtgggaaccacccttcactctctcctcctggcaatgcatacatga 772
Query: 521 cgtatgattctgacggtggcagagcacattatacagcccaacattcttctcattatgctc 580
||||||| ||| || || ||||||||| | || |||||| || |||||| ||| |
Sbjct: 773 tgtatgatggtgagggaggaagagcacatcacccatcccaac---ctcctcattttgccc 829
Query: 581 aagctggataccctcccacaagtgcttcccttcagaaccctgcaccccataatctcatgg 640
|| ||||||| || || ||||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 830 aatctggatatccaccaacaagtgcttctcttcagaaccctgcaggtcataatatcatgg 889
Query: 641 tccggaatcctagccagccgccgcaattcacacggagccatccctacaatgatctgattg 700
| || ||||||| | ||| | ||||| || | |||||| |||| ||| ||||||
Sbjct: 890 ttcgaaatccta---acccgacacaatttgttcgcaaccatccttacagtgacttgattg 946
Query: 701 aaaagttggtgaacatgggattcagaggcgatcatgtaggaagtgttatccagaggatgg 760
| |||||||||| |||||||||||| || || ||||| | ||| || |||||||||||||
Sbjct: 947 agaagttggtgagcatgggattcaggggtgaacatgtggtaagcgtgatccagaggatgg 1006
Query: 761 aggaaacagggcagcctgtagattttaactc 791
|||| | || |||||| ||||||| |||||
Sbjct: 1007 aggagagtggacagcctatagatttcaactc 1037