Miyakogusa Predicted Gene
- Lj3g3v2809070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2809070.1 Non Chatacterized Hit- tr|I3T3F4|I3T3F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.79,0,seg,NULL;
LIPOYLTRANSFERASE, PUTATIVE,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat dom,CUFF.44653.1
(1473 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72511 weakly similar to UniRef100_A7PJ25 Cluster: Chr... 2849 0.0
gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Ch... 68 2e-10
gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosom... 60 4e-08
gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Ch... 58 2e-07
gnl|LJGI|TC78710 weakly similar to UniRef100_A7PJ25 Cluster: Chr... 58 2e-07
>gnl|LJGI|TC72511 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (41%)
Length = 1907
Score = 2849 bits (1437), Expect = 0.0
Identities = 1464/1474 (99%), Gaps = 1/1474 (0%)
Strand = Plus / Plus
Query: 1 atgatgcttcttcgctcaagatggaaacaacatttcaacatgtctcttgtttctaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgatgcttcttcgctcaagatggaaacaacatttcaacatgtctcttgtttctaggcca 162
Query: 61 tttccgttgtactactccacggaagctccggttgatttctcagctctcgaaactcgcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tttccgttgtactactccacggaagctccggttgatttctcagctctcgaaactcgcgtt 222
Query: 121 ttgaagagcggtgaccccagaactccaatggctccgattctgaaccagtgggtcgaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttgaagagcggtgaccccagaactccaatggctccgattctgaaccagtgggtcgaagga 282
Query: 181 ggtggagacatcacgcaaattcagctccaacgtctcatcacccgcctcgcttatttccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggtggagacatcacgcaaattcagctccaacgtctcatcacccgcctcgcttatttccgc 342
Query: 241 cgattcacacatgcccttcaggtatcagagtggatgagcaatgaaaggaactatgattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cgattcacacatgcccttcaggtatcagagtggatgagcaatgaaaggaactatgattta 402
Query: 301 tcttctggattgattgctaaacgtatacacctcatatctaaagttcatggcctnnnnnnn 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcttctggattgattgctaaacgtatacacctcatatctaaagttcatggcctaaaaaaa 462
Query: 361 gcagaggattttttccaaggcattcctgatgataaaagggggttcaagatctatgcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcagaggattttttccaaggcattcctgatgataaaagggggttcaagatctatgcttct 522
Query: 421 cttttgagttgctatgcagaacataaatctttggaggaggcggaggctatcatgaagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cttttgagttgctatgcagaacataaatctttggaggaggcggaggctatcatgaagaaa 582
Query: 481 attaaggagttgcgacctatgcatttaacggtgtgttataacatattgctaaaactatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 attaaggagttgcgacctatgcatttaacggtgtgttataacatattgctaaaactatat 642
Query: 541 gctcagaaaggtaaatatgagaaattggataggttgatgcaagaaatgaaagagaatgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gctcagaaaggtaaatatgagaaattggataggttgatgcaagaaatgaaagagaatgac 702
Query: 601 ttgtgcaacggtgctacgtttaccattcggttgaatgcttacgtggccgcaaaagatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttgtgcaacggtgctacgtttaccattcggttgaatgcttacgtggccgcaaaagatgta 762
Query: 661 gaggggatggagaagctactaatgcagatggaagctgatcctatggcgactgtggactgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gaggggatggagaagctactaatgcagatggaagctgatcctatggcgactgtggactgg 822
Query: 721 tatacatactctacagcagcaaatggttatctgaaagctggcaatgttgagaaggccttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tatacatactctacagcagcaaatggttatctgaaagctggcaatgttgagaaggccttg 882
Query: 781 gctgcgttgaagaaatcagagcaatcagttaagggtaagaagttgaggcttgcctatgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gctgcgttgaagaaatcagagcaatcagttaagggtaagaagttgaggcttgcctatgaa 942
Query: 841 tctcttcaatctacatatgctgctattgggaataaggatgaggtttatcgactttggaat 900
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 943 tctcttcaatctacatatgctgctattgggaataacgatgaggtttatcgactttggaat 1002
Query: 901 aggattaagaatcttcaaaactgttggaactcaagttacatatgtatgctgagctcatta 960
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 aggattaagaatcttccaaactgttggaactcaagttacatatgtatgctgagctcatta 1062
Query: 961 ttgaagctggatgattttgatggtgcagagaagatcttggcagaatgggaatccgaacat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 ttgaagctggatgattttgatggtgcagagaagatcttggcagaatgggaatccgaacat 1122
Query: 1021 aaaaactttgacaccagaattccaaatttgatgatcactgcgtactgtaaacgaggtctg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 aaaaactttgacaccagaattccaaatttgatgatcactgcgtactgtaaacgaggtctg 1182
Query: 1081 ttagataaggctgaagcatatatccagaagctcttggatagtggcaagaaattagatgga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 ttagataaggctgaagcatatatccagaagctcttggatagtggcaagaaattagatgga 1242
Query: 1141 agttcatgggaccgtatggctgctggatatcacatggataatgatatggaaaaagcagtt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 agttcatgggaccgtatggctgctggatatcacatggataatgatatggaaaaagcagtt 1302
Query: 1201 caaacaatgaagaaagcaatcttggcaaatcgaccaggctggaggcctagcccctctact 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 caaacaatgaagaaagcaatcttggcaaatcgaccaggctggaggcctagcccctctact 1362
Query: 1261 ttggttgcttgtatcacgtacttgaaagaaaaacttgacttggaatcagctcttgagatt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 ttggttgcttgtatcacgtacttgaaagaaaaacttgacttggaatcagctcttgagatt 1422
Query: 1321 ttgaagttatgcaaagaagatggtcatatcaaaatcactacctatgatggactagtaagt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 ttgaagttatgcaaagaagatggtcatatcaaaatcactacctatgatggactagtaagt 1482
Query: 1381 tatgctcatggtgaaataccggataaagaggcccttgatttgatgaaacgagattatcaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 tatgctcatggtgaaataccggataaagaggcccttgatttgatgaaacgagattatcaa 1542
Query: 1441 atggatgg-aaaaaactatgggagaatataaaag 1473
|||||||| |||||||||||||||||||||||||
Sbjct: 1543 atggatggaaaaaaactatgggagaatataaaag 1576
>gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 833
Score = 67.9 bits (34), Expect = 2e-10
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 250 catgcccttcaggtatcagagtggatgagcaatgaaaggaac 291
|||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 285 catgcccttcagatatcagaatggatgagcaatgaaaggaac 326
>gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 436
Score = 60.0 bits (30), Expect = 4e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 235 ttccgccgattcacacatgcccttcaggtatcagagtggatgagcaatgaaaggaactat 294
||||| || |||| ||||||||||||| |||| || ||||||||| ||||||||||| ||
Sbjct: 298 ttccgtcgcttcaaacatgcccttcagatatcggaatggatgagcgatgaaaggaaccat 357
Query: 295 gattta 300
|||||
Sbjct: 358 tattta 363
>gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Chromosome chr10
scaffold_433, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_433, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 267
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 250 catgcccttcaggtatcagagtggatgagcaatgaaaggaa 290
||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 212 catgctcttcagatatcagaatggatgagcaatgaaaggaa 252
>gnl|LJGI|TC78710 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 723
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1183 gatatggaaaaagcagttcaaacaatgaagaaagcaatcttggcaaatcgaccaggctgg 1242
|||||||| |||||| || ||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 272 gatatggataaagcacttgaaacaatgaagaaagcaattttggctggtcgaccaggatgg 331
Query: 1243 a 1243
|
Sbjct: 332 a 332