Miyakogusa Predicted Gene
- Lj3g3v2785700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2785700.1 Non Chatacterized Hit- tr|E1ZQ67|E1ZQ67_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,41.35,3e-17,seg,NULL; PSII_Pbs27,Photosystem II
Pbs27,CUFF.44639.1
(456 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60385 similar to UniRef100_A7PXD5 Cluster: Chromosome... 733 0.0
gnl|LJGI|BW620822 similar to UniRef100_A7PXD5 Cluster: Chromosom... 420 e-117
gnl|LJGI|BP029067 similar to UniRef100_A7PXD5 Cluster: Chromosom... 139 2e-32
>gnl|LJGI|TC60385 similar to UniRef100_A7PXD5 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 968
Score = 733 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Plus
Query: 83 cggcctcatttctctccggcacatggctgtgtcacgtgacccctgcactggctgccgagg 142
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cggcctcagttctctccggcacatggctgtgtcacgtgacccctgcactggctgccgagg 278
Query: 143 acgaagagtacgtgagagaaacagaagaagtgatcaacaaggtgagaaccaccatcacaa 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 acgaagagtacgtgagagaaacagaagaagtgatcaacaaggtgagaaccaccatcacaa 338
Query: 203 tggacaagaacgaccccaacgttgctgatgcggttgctgacttgagagactcgtcgaact 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tggacaagaacgaccccaacgttgctgatgcggttgctgacttgagagactcgtcgaact 398
Query: 263 cgtgggtggctaagtacagaaaggagaaagcgcttcttgcaagggtttccttcagggacg 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cgtgggtggctaagtacagaaaggagaaagcgcttcttgcaagggtttccttcagggacg 458
Query: 323 tgtactctgctctcaatgcggtttcagggcactacatcagttttggaccaaccgctccga 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgtactctgctctcaatgcggtttcagggcactacatcagttttggaccaaccgctccga 518
Query: 383 ttccggcgaagcgaagggcgaggattttggaggaggtggaggttgctgagaaggcacttc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttccggcgaagcgaagggcgaggattttggaggaggtggaggttgctgagaaggcacttc 578
Query: 443 taaggggaagatga 456
||||||||||||||
Sbjct: 579 taaggggaagatga 592
Score = 165 bits (83), Expect = 3e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 atggcctccccaacactcataactccaacctccacaccaaaatcactaccacccatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggcctccccaacactcataactccaacctccacaccaaaatcactaccacccatcaaa 130
Query: 61 cccagacccaccaccgccattgc 83
|||||||||||||||||||||||
Sbjct: 131 cccagacccaccaccgccattgc 153
>gnl|LJGI|BW620822 similar to UniRef100_A7PXD5 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 479
Score = 420 bits (212), Expect = e-117
Identities = 215/216 (99%)
Strand = Plus / Plus
Query: 83 cggcctcatttctctccggcacatggctgtgtcacgtgacccctgcactggctgccgagg 142
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cggcctcagttctctccggcacatggctgtgtcacgtgacccctgcactggctgccgagg 323
Query: 143 acgaagagtacgtgagagaaacagaagaagtgatcaacaaggtgagaaccaccatcacaa 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acgaagagtacgtgagagaaacagaagaagtgatcaacaaggtgagaaccaccatcacaa 383
Query: 203 tggacaagaacgaccccaacgttgctgatgcggttgctgacttgagagactcgtcgaact 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggacaagaacgaccccaacgttgctgatgcggttgctgacttgagagactcgtcgaact 443
Query: 263 cgtgggtggctaagtacagaaaggagaaagcgcttc 298
||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgtgggtggctaagtacagaaaggagaaagcgcttc 479
Score = 157 bits (79), Expect = 7e-38
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 atggcctccccaacactcataactccaacctccacaccaaaatcactaccacccatcaaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atggcctccccgacactcataactccaacctccacaccaaaatcactaccacccatcaaa 175
Query: 61 cccagacccaccaccgccattgc 83
|||||||||||||||||||||||
Sbjct: 176 cccagacccaccaccgccattgc 198
>gnl|LJGI|BP029067 similar to UniRef100_A7PXD5 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 477
Score = 139 bits (70), Expect = 2e-32
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 387 ggcgaagcgaagggcgaggattttggaggaggtggaggttgctgagaaggcacttctaag 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggcgaagcgaagggcgaggattttggaggaggtggaggttgctgagaaggcacttctaag 418
Query: 447 gggaagatga 456
||||||||||
Sbjct: 417 gggaagatga 408