Miyakogusa Predicted Gene

Lj3g3v2782630.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2782630.1 Non Chatacterized Hit- tr|C6T1N5|C6T1N5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,70,0.00000000001, ,CUFF.44631.1
         (158 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79175 similar to UniRef100_UPI000069E310 Cluster: Mot...   313   2e-85
gnl|LJGI|TC76347                                                       74   3e-13

>gnl|LJGI|TC79175 similar to UniRef100_UPI000069E310 Cluster: Mothers against
           decapentaplegic homolog 3 (SMAD 3) (Mothers against DPP
           homolog 3) (Mad3) (hMAD-3) (JV15-2) (hSMAD3).; n=1;
           Xenopus tropicalis|Rep: Mothers against decapentaplegic
           homolog 3 (SMAD 3) (Mothers against DPP homolog 3)
           (Mad3) (hMAD-3) (JV15-2) (hSMAD3). - Xenopus tropicalis,
           partial (7%)
          Length = 375

 Score =  313 bits (158), Expect = 2e-85
 Identities = 158/158 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgaagatcgaagaactggacgagcccgtcaccaaaatgacgactaagaggaatcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35  atggcgaagatcgaagaactggacgagcccgtcaccaaaatgacgactaagaggaatcac 94

                                                                       
Query: 61  ggctccaccagattcttcgtcttcgttgattacctcttcctcacgatcttcctgggattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ggctccaccagattcttcgtcttcgttgattacctcttcctcacgatcttcctgggattc 154

                                                 
Query: 121 ctctcctacatcattttcaagtttctcagcaattgatt 158
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ctctcctacatcattttcaagtttctcagcaattgatt 192


>gnl|LJGI|TC76347 
          Length = 440

 Score = 73.8 bits (37), Expect = 3e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 72  attcttcgtcttcgttgattacctcttcctcacgatcttcctgggattcctctcctacat 131
           |||||||||||||||||||||||| ||||||  |||||| ||||| ||||||| || |||
Sbjct: 52  attcttcgtcttcgttgattaccttttcctcttgatctttctgggtttcctctgcttcat 111

                    
Query: 132 cattttcaa 140
           ||| |||||
Sbjct: 112 catcttcaa 120