Miyakogusa Predicted Gene
- Lj3g3v2781610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2781610.1 tr|Q0IHG9|Q0IHG9_XENLA MGC154358 protein
OS=Xenopus laevis GN=MGC154358 PE=2 SV=1,30.1,7e-19,SUBFAMILY NOT
NAMED,NULL; PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17),Mpv17/PMP22;
seg,NULL; Mpv17,CUFF.44627.1
(834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76029 similar to UniRef100_UPI000034F0D0 Cluster: per... 757 0.0
gnl|LJGI|TC57862 similar to UniRef100_A7P1H6 Cluster: Chromosome... 188 4e-47
>gnl|LJGI|TC76029 similar to UniRef100_UPI000034F0D0 Cluster: peroxisomal membrane
protein-related; n=1; Arabidopsis thaliana|Rep:
peroxisomal membrane protein-related - Arabidopsis
thaliana, partial (28%)
Length = 692
Score = 757 bits (382), Expect = 0.0
Identities = 389/390 (99%), Gaps = 1/390 (0%)
Strand = Plus / Plus
Query: 30 ccgtgaacttgaagaggagggatcttcttcaccttccgataaggatagcacagaggttgc 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccgtgaacttgaagaggagggatcttcttcaccttccgataaggatagcacagaggttgc 363
Query: 90 tcgtgattctgatattgtcaccagcagggccgtcaatgccatcattgttttggggtttgg 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcgtgattctgatattgtcaccagcagggccgtcaatgccatcattgttttggggtttgg 423
Query: 150 cacttttgctgtcaccaaattgctcaccattgaccatgattactggcatggttggacctt 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cacttttgctgtcaccaaattgctcaccattgaccatgattactggcatggttggacctt 483
Query: 210 ttatgagattctaaggtatgcacctgaacacaattggattgcctatgaggaagctctgaa 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttatgagattctaaggtatgcacctgaacacaattggattgcctatgaggaagctctgaa 543
Query: 270 gagaaacccagttttagctaaaatggcaataagtggggttgtctactcaattggagactg 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gagaaacccagttttagctaaaatggcaataagtggggttgtctactcaattggagactg 603
Query: 330 gattgctcagtgctatgaaggaaagcctattttcgagtttgatcggacacgactattcag 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gattgctcagtgctatgaaggaaagcctattttcgagtttgatcggacacgactattcag 663
Query: 390 atcaggtcttgttgggtttactctccatgg 419
|||| |||||||||||||||||||||||||
Sbjct: 664 atca-gtcttgttgggtttactctccatgg 692
Score = 58.0 bits (29), Expect = 9e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atgccgtatcatcacctccgtcgcggagg 29
|||||||||||||||||||||||||||||
Sbjct: 226 atgccgtatcatcacctccgtcgcggagg 254
>gnl|LJGI|TC57862 similar to UniRef100_A7P1H6 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1420
Score = 188 bits (95), Expect = 4e-47
Identities = 485/615 (78%)
Strand = Plus / Plus
Query: 151 acttttgctgtcaccaaattgctcaccattgaccatgattactggcatggttggaccttt 210
||||||||||||||||| | || |||||||| ||||||||||||||| ||||| ||
Sbjct: 461 acttttgctgtcaccaagcttcttaccattgatagtgattactggcatggatggacactt 520
Query: 211 tatgagattctaaggtatgcacctgaacacaattggattgcctatgaggaagctctgaag 270
||||||||| |||| ||||| ||| | ||||| |||| ||| |||||||||||||| |||
Sbjct: 521 tatgagattgtaagatatgcccctcagcacaactggactgcttatgaggaagctcttaag 580
Query: 271 agaaacccagttttagctaaaatggcaataagtggggttgtctactcaattggagactgg 330
| ||| |||||||| || || |||| || ||||| ||||| ||||| |||| ||||||
Sbjct: 581 acaaatccagttttcgccaagatggtgatcagtggtgttgtttactctgttggggactgg 640
Query: 331 attgctcagtgctatgaaggaaagcctattttcgagtttgatcggacacgactattcaga 390
||||| ||||||| ||||||||| ||| | || |||||||| || | || | ||||||
Sbjct: 641 attgcacagtgctttgaaggaaaacctctctttgagtttgaccgtgcgcggatgttcaga 700
Query: 391 tcaggtcttgttgggtttactctccatggatcgctttctcactattactatcaagtttgt 450
||||| |||||||| |||||||| ||||| || |||||||| || || ||||| ||||
Sbjct: 701 tcaggccttgttggttttactctacatggctctctttctcattactattatcagttttgc 760
Query: 451 gaggctctttttcctttcaaacaatggtgggtcgtccctgctaaagttgcttttgatcaa 510
|||| || ||||||| |||| ||||||||| || |||| ||||||| || ||||||
Sbjct: 761 gaggagctatttccttacaaaggatggtgggtagttcctgtcaaagttgtcttcgatcaa 820
Query: 511 actgtgtgggcagcaatttggaacagcatctactttgtagctttgggcttgttgcgtttc 570
|||| ||| | ||| |||||||||| ||||| | | || | | || || |||||||
Sbjct: 821 actgcatggtcggcagtttggaacagtatctattatacagttgtaggattcctgcgtttt 880
Query: 571 gaatcattgactaacatatatggtgaactgaagtcaacattttggcccatgcttactgca 630
|| || || || || | | |||| ||| | ||||||||| |||||| | || |||
Sbjct: 881 gattctccgatcaatatttttaatgaattgagggcaacattttttcccatgttgacggca 940
Query: 631 ggttggaagctttggccttttgcccatttggttacttatggtgtgattccggtggaacaa 690
|| |||||||| ||||| ||||| ||| | ||||||| ||||| | || || || |||
Sbjct: 941 gggtggaagctgtggccatttgctcatctcattacttacggtgtagtaccagttgagcaa 1000
Query: 691 aggcttctttgggtggacagtgtggagctcatctgggtcacaatactctcaacatattca 750
|| |||||||||||||| | || ||||| || ||||| || ||||| ||||||||||||
Sbjct: 1001 agacttctttgggtggatatggtagagcttatttgggtgaccatactttcaacatattca 1060
Query: 751 aatgagaaatcagaa 765
||||| |||||||||
Sbjct: 1061 aatgaaaaatcagaa 1075