Miyakogusa Predicted Gene

Lj3g3v2769430.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2769430.1 CUFF.44608.1
         (349 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82733 UniRef100_Q9SLR6 Cluster: AHM1; n=1; Triticum a...   289   6e-78
gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Le...    60   9e-09

>gnl|LJGI|TC82733 UniRef100_Q9SLR6 Cluster: AHM1; n=1; Triticum aestivum|Rep: AHM1 -
            Triticum aestivum (Wheat), partial (3%)
          Length = 1371

 Score =  289 bits (146), Expect = 6e-78
 Identities = 152/154 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgggtgaggttgctggtggtggcgaaaaattggaactttggcagattaaaaaggcgtgg 60
            ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 915  atgggtgaggttgctggtggtggcgaaaaattgaaactttggcagattaagaaggcgtgg 974

                                                                        
Query: 61   gaaatttttggtgatgggtggtggggtttgagttgcggagaaaggggagttttcagaatc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  gaaatttttggtgatgggtggtggggtttgagttgcggagaaaggggagttttcagaatc 1034

                                              
Query: 121  tggtgtggggtttgtggatgtgggtatggtgggt 154
            ||||||||||||||||||||||||||||||||||
Sbjct: 1035 tggtgtggggtttgtggatgtgggtatggtgggt 1068



 Score =  184 bits (93), Expect = 2e-46
 Identities = 96/97 (98%)
 Strand = Plus / Plus

                                                                        
Query: 253  tttgtgtatgtttggtgggacggtgctttgatgaagatggtgtggttcttttatgatgat 312
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1161 tttgtgtatgtttggtgggacggtgctttgatgaagatggtgtggttcttttatgatgtt 1220

                                                 
Query: 313  aatgtttttcttaatttggatttgggtgtgggatgaa 349
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1221 aatgtttttcttaatttggatttgggtgtgggatgaa 1257


>gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Leucine rich repeat
           protein precursor; n=1; Cicer arietinum|Rep: Leucine
           rich repeat protein precursor - Cicer arietinum
           (Chickpea) (Garbanzo), partial (12%)
          Length = 759

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 125 gtggggtttgtggatgtgggtatggtgggt 154
           ||||||||||||||||||||||||||||||
Sbjct: 151 gtggggtttgtggatgtgggtatggtgggt 122