Miyakogusa Predicted Gene
- Lj3g3v2769380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2769380.1 Non Chatacterized Hit- tr|I1M3W9|I1M3W9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18832 PE,92.03,0,no
description,Zinc finger, RING/FYVE/PHD-type; coiled-coil,NULL;
VACUOLAR MEMBRANE PROTEIN PEP3,NUL,CUFF.44621.1
(2973 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82472 similar to UniRef100_A7Q380 Cluster: Chromosome... 1409 0.0
gnl|LJGI|TC79362 homologue to UniRef100_A7Q380 Cluster: Chromoso... 924 0.0
gnl|LJGI|TC69167 similar to UniRef100_A7Q380 Cluster: Chromosome... 624 e-178
>gnl|LJGI|TC82472 similar to UniRef100_A7Q380 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1059
Score = 1409 bits (711), Expect = 0.0
Identities = 714/715 (99%)
Strand = Plus / Plus
Query: 1736 catacgaaactgtggagtcatggatgactacaaagaatctgaatccaaggaaactgattc 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catacgaaactgtggagtcatggatgactacaaagaatctgaatccaaggaaactgattc 60
Query: 1796 ctgcaatgatgcgttattcaagtgaacctcatgcaaagaatgagacgcatgaagtcatta 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcaatgatgcgttattcaagtgaacctcatgcaaagaatgagacgcatgaagtcatta 120
Query: 1856 agtatcttgaatattgtgttcatagattgcataatgaagatcctggagttcataacctgc 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtatcttgaatattgtgttcatagattgcataatgaagatcctggagttcataacctgc 180
Query: 1916 ttctttctttatatgcaaagcaggaagatgatagttcacttctacgtttcctacaatgca 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctttctttatatgcaaagcaggaagatgatagttcacttctacgtttcctacaatgca 240
Query: 1976 aatttggaaaaggaccagataatggtcctgagttcttttatgatcctaagtatgctctgc 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatttggaaaaggaccagataatggtcctgagttcttttatgatcctaagtatgctctgc 300
Query: 2036 gtcttctcctcaaggaaaaacgaatgcgtgcatgtgttcatatatacagcatgatgtcta 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcttctcctcaaggaaaaacgaatgcgtgcatgtgttcatatatacagcatgatgtcta 360
Query: 2096 tgcatgaagaagcagttgctcttgccctacaggttgaccctgagctagctatggctgaag 2155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcatgaagaagcagttgctcttgccctacaggttgaccctgagctagctatggctgaag 420
Query: 2156 ctgataaggttgaagatgatgaagacttgagaaagaagctctggctcatgattgccaagc 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgataaggttgaagatgatgaagacttgagaaagaagctctggctcatgattgccaagc 480
Query: 2216 atgttgttgaacaagaaaaaggaactaagagggagaacataagaaaggcgattgcatttc 2275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgttgttgaacaagaaaaaggaactaagagggagaacataagaaaggcgattgcatttc 540
Query: 2276 ttaaagaaactgatggcctgctgaagattgaggacatcttaccattctttccagattttg 2335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaaagaaactgatggcctgctgaagattgaggacatcttaccattctttccagattttg 600
Query: 2336 ccctgattgatgacttcaaggaggctatctgttcatctttggaggattataacaagcaaa 2395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccctgattgatgacttcaaggaggctatctgttcatctttggaggattataacaagcaac 660
Query: 2396 ttgaacagctgaaggaagagatgaatgatgcaactcatggtgctgacaacatcag 2450
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgaacagctgaaggaagagatgaatgatgcaactcatggtgctgacaacatcag 715
Score = 678 bits (342), Expect = 0.0
Identities = 351/353 (99%), Gaps = 2/353 (0%)
Strand = Plus / Plus
Query: 2569 acatcagttggacagatggcttcattttatgtctttccgtgtggacattccttccatgca 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 acatcagttggacagatggcttcattttatgtctttccgtgtggacattccttccatgca 768
Query: 2629 caatgcctaattgcccatgtgactcgttgtacagttgaggcccatgctgagtacattctg 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 caatgcctaattgcccatgtgactcgttgtacagttgaggcccatgctgagtacattctg 828
Query: 2689 gatctgcagaagcaacttaccttgataggcagtgaagcaaggagagaatccaatggcacc 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gatctgcagaagcaacttaccttgataggcagtgaagcaaggagagaatccaatggcacc 888
Query: 2749 ctttcttcagaggagtccatacctagcacgataactgtagaaaagctccgatcacaacta 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ctttcttcagaggagtccatacctagcacgataactgtagaaaagctccgatcacaacta 948
Query: 2809 gatgatgctatagctagtgaatgccccttttgcggcgacttaatgatccgagagatttcg 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 gatgatgctatagctagtgaatgccccttttgcggcgacttaatgatccgagagatttcg 1008
Query: 2869 ttgtctttcatccttcctgaggaagagcagcatgtgctatcatgggagataaa 2921
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1009 ttgtctttcatccttcctgag--agagcagcatgtgctatcatgggagataaa 1059
>gnl|LJGI|TC79362 homologue to UniRef100_A7Q380 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 490
Score = 924 bits (466), Expect = 0.0
Identities = 487/490 (99%), Gaps = 3/490 (0%)
Strand = Plus / Plus
Query: 2123 tacaggttgaccctgagctagctatggctgaagctgataaggttgaagatgatgaagact 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacaggttgaccctgagctagctatggctgaagctgataaggttgaagatgatgaagact 60
Query: 2183 tgagaaagaagctctggctcatgattgccaagcatgttgttgaacaagaaaaaggaacta 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagaaagaagctctggctcatgattgccaagcatgttgttgaacaagaaaaaggaacta 120
Query: 2243 agagggagaacataagaaaggcgattgcatttcttaaagaaactgatggcctgctgaaga 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagggagaacataagaaaggcgattgcatttcttaaagaaactgatggcctgctgaaga 180
Query: 2303 ttgaggacatcttaccattctttccagattttgccctgattgatgacttcaaggaggcta 2362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaggacatcttaccattctttccagattttgccctgattgatgacttcaaggaggcta 240
Query: 2363 tctgttcatctttggaggattataacaagcaaattgaacagctgaaggaagagatgaatg 2422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgttcatctttggaggattataacaagcaaattgaacagctgaaggaagagatgaatg 300
Query: 2423 atgcaactcatggtgctgacaacatcagaaatgatataagtgcacttgctcaaagatgcg 2482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgcaactcatggtgctgacaacatcagaaatgatataagtgcacttgctcaaagatgcg 360
Query: 2483 ctgttattgatagagatgaggaatgt-ggggtttgccggcgaaaaattctaactgctggc 2541
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 ctgttattgatagagatgaggaatgtgggggtttgccggcgaaaaattctaactgctggc 420
Query: 2542 agagagtttggtattggt-cgtggttatacatcagttggacagatggcttca-ttttatg 2599
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 agagagtttggtattggtccgtggttatacatcagttggacagatggcttcatttttatg 480
Query: 2600 tctttccgtg 2609
||||||||||
Sbjct: 481 tctttccgtg 490
>gnl|LJGI|TC69167 similar to UniRef100_A7Q380 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 564
Score = 624 bits (315), Expect = e-178
Identities = 317/318 (99%)
Strand = Plus / Plus
Query: 2656 tgtacagttgaggcccatgctgagtacattctggatctgcagaagcaacttaccttgata 2715
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtacanttgaggcccatgctgagtacattctggatctgcagaagcaacttaccttgata 60
Query: 2716 ggcagtgaagcaaggagagaatccaatggcaccctttcttcagaggagtccatacctagc 2775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcagtgaagcaaggagagaatccaatggcaccctttcttcagaggagtccatacctagc 120
Query: 2776 acgataactgtagaaaagctccgatcacaactagatgatgctatagctagtgaatgcccc 2835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgataactgtagaaaagctccgatcacaactagatgatgctatagctagtgaatgcccc 180
Query: 2836 ttttgcggcgacttaatgatccgagagatttcgttgtctttcatccttcctgaggaagag 2895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttgcggcgacttaatgatccgagagatttcgttgtctttcatccttcctgaggaagag 240
Query: 2896 cagcatgtgctatcatgggagataaaaccagagataaaaccaaacgttggaagccagaga 2955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcatgtgctatcatgggagataaaaccagagataaaaccaaacgttggaagccagaga 300
Query: 2956 agtatcacgttatcatga 2973
||||||||||||||||||
Sbjct: 301 agtatcacgttatcatga 318