Miyakogusa Predicted Gene
- Lj3g3v2746110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2746110.1 tr|D3EPF3|D3EPF3_UCYNA Protein thf1
OS=cyanobacterium UCYN-A GN=thf1 PE=3 SV=1,29.72,2e-18,PS_II_psb29:
photosystem II biogenesis protein Psp,Photosystem II Psp29,
biogenesis; coiled-coil,NUL,
NODE_25831_length_1355_cov_419.680450.path1.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65881 similar to UniRef100_A7Q395 Cluster: Chromosome... 1778 0.0
gnl|LJGI|TC58690 similar to UniRef100_A7Q395 Cluster: Chromosome... 688 0.0
gnl|LJGI|TC67671 similar to UniRef100_A7Q395 Cluster: Chromosome... 472 e-132
gnl|LJGI|FS331845 weakly similar to UniRef100_A7Q395 Cluster: Ch... 394 e-109
>gnl|LJGI|TC65881 similar to UniRef100_A7Q395 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1334
Score = 1778 bits (897), Expect = 0.0
Identities = 897/897 (100%)
Strand = Plus / Plus
Query: 1 atggctgctctcacctctctgtctttctcagcagtgactcaatgctcagaaagaaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atggctgctctcacctctctgtctttctcagcagtgactcaatgctcagaaagaaaagcc 151
Query: 61 actctatcctccactcgtttccttgcttccaattctgaggtctttaggattcgaaccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 actctatcctccactcgtttccttgcttccaattctgaggtctttaggattcgaaccgac 211
Query: 121 ttctcttaccattatgggggtgttcgagcttccaattcttcatctaaaatggttattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttctcttaccattatgggggtgttcgagcttccaattcttcatctaaaatggttattcaa 271
Query: 181 tgcatgtcttctgagacagatgttcctccccctgtttccgagacaaagttaagttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgcatgtcttctgagacagatgttcctccccctgtttccgagacaaagttaagttttctt 331
Query: 241 aaggcatataagcgaccaatccctagtatctacaacaatgtcctgcaagagctgattgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaggcatataagcgaccaatccctagtatctacaacaatgtcctgcaagagctgattgtc 391
Query: 301 cagcaacatttaatgaaatacaaggcatcataccggtatgaccctgtgtttgctcttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cagcaacatttaatgaaatacaaggcatcataccggtatgaccctgtgtttgctcttggt 451
Query: 361 tttgtcactgtatatgataaactcatggaggggtaccctagtgatgaggacagagatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttgtcactgtatatgataaactcatggaggggtaccctagtgatgaggacagagatgcc 511
Query: 421 atcttccaagcctacatcaatgcattgaaggaagacccagaacaatacagaaaagatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atcttccaagcctacatcaatgcattgaaggaagacccagaacaatacagaaaagatgca 571
Query: 481 caaaagttggaagagtgggcccgggctcaaaacccaacttccctggttgagttttcatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caaaagttggaagagtgggcccgggctcaaaacccaacttccctggttgagttttcatcc 631
Query: 541 aaagaaggagaagtggaggggatcttaaaggatattgcagtaagagcagggggaaagggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aaagaaggagaagtggaggggatcttaaaggatattgcagtaagagcagggggaaagggt 691
Query: 601 gaattcagttatagtcgtttctttgctgtaggcctctttcgtcttcttgagttggcaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaattcagttatagtcgtttctttgctgtaggcctctttcgtcttcttgagttggcaaat 751
Query: 661 gcaacggaaccaacaattttggaaaagctttgcgcggctttgaacattgacaaaagaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gcaacggaaccaacaattttggaaaagctttgcgcggctttgaacattgacaaaagaagt 811
Query: 721 gttgatcgggacttggatgtgtatcgtaatctgctttctaggttggttcaagctaaagag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gttgatcgggacttggatgtgtatcgtaatctgctttctaggttggttcaagctaaagag 871
Query: 781 ctgctaagggaatatgttgacagggagaagaagaaaagagaagaaagggccgagccacag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ctgctaagggaatatgttgacagggagaagaagaaaagagaagaaagggccgagccacag 931
Query: 841 aaggctaatgaggccgttacaaaatgtttggggcatcaattgtctgtcctgtagtct 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 aaggctaatgaggccgttacaaaatgtttggggcatcaattgtctgtcctgtagtct 988
>gnl|LJGI|TC58690 similar to UniRef100_A7Q395 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1377
Score = 688 bits (347), Expect = 0.0
Identities = 590/671 (87%)
Strand = Plus / Plus
Query: 205 cctccccctgtttccgagacaaagttaagttttcttaaggcatataagcgaccaatccct 264
||||| |||||||| ||||||||||||| |||||| |||| |||||| |||||||| |||
Sbjct: 345 cctccacctgtttctgagacaaagttaaattttctcaaggaatataaacgaccaattcct 404
Query: 265 agtatctacaacaatgtcctgcaagagctgattgtccagcaacatttaatgaaatacaag 324
||||||||||||| || ||||| ||||| || |||||||||||||| |||| || ||||
Sbjct: 405 agtatctacaacacggttctgcaggagctcatagtccagcaacatttgatgagattcaag 464
Query: 325 gcatcataccggtatgaccctgtgtttgctcttggttttgtcactgtatatgataaactc 384
|| ||||| ||||||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 465 aggtcgtaccgctatgaccctgtatttgctcttggcttcgtcactgtatatgagcaactc 524
Query: 385 atggaggggtaccctagtgatgaggacagagatgccatcttccaagcctacatcaatgca 444
||||| ||||| ||||||||||||||| | ||||||||||| ||||| |||||||| |||
Sbjct: 525 atggaagggtatcctagtgatgaggaccgcgatgccatctttcaagcatacatcaaggca 584
Query: 445 ttgaaggaagacccagaacaatacagaaaagatgcacaaaagttggaagagtgggcccgg 504
|||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 585 ttgaaggaagacccagggcaatacagagaagatgcacaaaagttggaagaatgggcccgg 644
Query: 505 gctcaaaacccaacttccctggttgagttttcatccaaagaaggagaagtggaggggatc 564
| |||| | |||| || ||| |||| |||||||| | |||||||||||| ||||||
Sbjct: 645 acacaaagctcaacatcactgattgaattttcatcgagagaaggagaagttgagggggca 704
Query: 565 ttaaaggatattgcagtaagagcagggggaaagggtgaattcagttatagtcgtttcttt 624
|||||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 705 ttaaaggatattgcagaaagagcaggaggaaagggggatttcagttatagtcgtttcttc 764
Query: 625 gctgtaggcctctttcgtcttcttgagttggcaaatgcaacggaaccaacaattttggaa 684
|| ||||||| |||||||||||||| ||| |||||||| ||||||| |||||||||||
Sbjct: 765 gcaataggcctttttcgtcttcttgaactgggaaatgcaatggaaccagcaattttggaa 824
Query: 685 aagctttgcgcggctttgaacattgacaaaagaagtgttgatcgggacttggatgtgtat 744
|||||||| ||||||||||| | |||||||||||||| |||||||||||||| |||||
Sbjct: 825 aagctttgtgcggctttgaatgtcgacaaaagaagtgtggatcgggacttggacgtgtac 884
Query: 745 cgtaatctgctttctaggttggttcaagctaaagagctgctaagggaatatgttgacagg 804
|||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 885 cgtaatctgctttctaagttggttcaagctaaagagctgctaaaggaatatgctgacagg 944
Query: 805 gagaagaagaaaagagaagaaagggccgagccacagaaggctaatgaggccgttacaaaa 864
||||||||||| |||||||||||| ||||| || ||||||||||||||| ||||||||
Sbjct: 945 gagaagaagaagcaagaagaaagggctgagccgcaaaaggctaatgaggccattacaaaa 1004
Query: 865 tgtttggggca 875
|||||||||||
Sbjct: 1005 tgtttggggca 1015
>gnl|LJGI|TC67671 similar to UniRef100_A7Q395 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 640
Score = 472 bits (238), Expect = e-132
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 660 tgcaacggaaccaacaattttggaaaagctttgcgcggctttgaacattgacaaaagaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaacggaaccaacaattttggaaaagctttgcgcggctttgaacattgacaaaagaag 60
Query: 720 tgttgatcgggacttggatgtgtatcgtaatctgctttctaggttggttcaagctaaaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttgatcgggacttggatgtgtatcgtaatctgctttctaggttggttcaagctaaaga 120
Query: 780 gctgctaagggaatatgttgacagggagaagaagaaaagagaagaaagggccgagccaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgctaagggaatatgttgacagggagaagaagaaaagagaagaaagggccgagccaca 180
Query: 840 gaaggctaatgaggccgttacaaaatgtttggggcatcaattgtctgtcctgtagtct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaggctaatgaggccgttacaaaatgtttggggcatcaattgtctgtcctgtagtct 238
>gnl|LJGI|FS331845 weakly similar to UniRef100_A7Q395 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 737
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 1 atggctgctctcacctctctgtctttctcagcagtgactcaatgctcagaaagaaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggctgctctcacctctctgtctttctcagcagtgactcaatgctcagaaagaaaagcc 230
Query: 61 actctatcctccactcgtttccttgcttccaattctgaggtctttaggattcgaaccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 actctatcctccactcgtttccttgcttccaattctgaggtctttaggattcgaaccgac 290
Query: 121 ttctcttaccattatgggggtgttcgagcttccaattcttcatctaaaatggttattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttctcttaccattatgggggtgttcgagcttccaattcttcatctaaaatggttattcaa 350
Query: 181 tgcatgtcttctgagacag 199
|||||||||||||||||||
Sbjct: 351 tgcatgtcttctgagacag 369