Miyakogusa Predicted Gene
- Lj3g3v2742950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2742950.1 tr|I3RZ73|I3RZ73_LOTJA Cytochrome b6-f complex
iron-sulfur subunit OS=Lotus japonicus PE=2 SV=1,95.36,0,no
description,Rieske [2Fe-2S] iron-sulphur domain; seg,NULL;
CytB6-F_Fe-S,Cytochrome b6-f complex F,CUFF.44592.1
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59529 similar to UniRef100_P26291 Cluster: Cytochrome... 1051 0.0
gnl|LJGI|AV408706 similar to UniRef100_P26291 Cluster: Cytochrom... 307 5e-83
gnl|LJGI|AV766170 86 3e-16
>gnl|LJGI|TC59529 similar to UniRef100_P26291 Cluster: Cytochrome b6-f complex
iron-sulfur subunit, chloroplast precursor; n=1; Pisum
sativum|Rep: Cytochrome b6-f complex iron-sulfur
subunit, chloroplast precursor - Pisum sativum (Garden
pea), partial (97%)
Length = 940
Score = 1051 bits (530), Expect = 0.0
Identities = 539/542 (99%)
Strand = Plus / Plus
Query: 176 tggctaccagcatccctgcctatcgagtccctgatatggagaaaaggaagctcttgaatt 235
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tggctaccagcattcctgctgatcgagtccctgatatggagaaaaggaagctcttgaatt 288
Query: 236 tgcttcttcttggtgctatttcactccccagtgctggaatgcttgtcccttatgccacct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgcttcttcttggtgctatttcactccccagtgctggaatgcttgtcccttatgccacct 348
Query: 296 tcttcgcccctccagggtcaggttctgcaactggtggtactattgcaaaggatgccattg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tcttcgcccctccagggtcaggttctgcaactggtggtactattgcaaaggatgccattg 408
Query: 356 gaaatgatgtagttgcagagcaatggctcaaggcacatggacctggtgaccgtacgctta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaaatgatgtagttgcagagcaatggctcaaggcacatggacctggtgaccgtacgctta 468
Query: 416 cacaaggattgaagggagatcctacctaccttgtggtggagaaagacagaacacttgcaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cacaaggattgaagggagatcctacctaccttgtggtggagaaagacagaacacttgcaa 528
Query: 476 catatggtattaacgctgtttgcacccaccttgggtgtgtcgtgccgtttaatacagctg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 catatggtattaacgctgtttgcacccaccttgggtgtgtcgtgccgtttaatacagctg 588
Query: 536 agaaaaagttcatctgcccctgccatggatctcagtacaatgaccaaggaagagttgtga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 agaaaaagttcatctgcccctgccatggatctcagtacaatgaccaaggaagagttgtga 648
Query: 596 gaggacctgctcccttgtctctggcattggcacattgtgatgtggttgatgggaaggtgg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaggacctgctcccttgtctctggcattggcacattgtgatgtggttgatgggaaggtgg 708
Query: 656 tgtttgttccttgggtcgaaacagatttcagaactggtgatgctccatggtgggcttaga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgtttgttccttgggtcgaaacagatttcagaactggtgatgctccatggtgggcttaga 768
Query: 716 at 717
||
Sbjct: 769 at 770
Score = 307 bits (155), Expect = 5e-83
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtccacaactctctcccctgtaaccccttcacagctatgttctggaaagagtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgtcgtccacaactctctcccctgtaaccccttcacagctatgttctggaaagagtgga 143
Query: 61 attttctgtccctcacaagcgcttcttgtgaaaccagcaaggaaccagatggtggggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 attttctgtccctcacaagcgcttcttgtgaaaccagcaaggaaccagatggtggggaag 203
Query: 121 gccaaggggattagaattgcttgcatggctaccag 155
|||||||||||||||||||||||||||||||||||
Sbjct: 204 gccaaggggattagaattgcttgcatggctaccag 238
>gnl|LJGI|AV408706 similar to UniRef100_P26291 Cluster: Cytochrome b6-f complex
iron-sulfur subunit, chloroplast precursor; n=1; Pisum
sativum|Rep: Cytochrome b6-f complex iron-sulfur
subunit, chloroplast precursor - Pisum sativum (Garden
pea), partial (44%)
Length = 429
Score = 307 bits (155), Expect = 5e-83
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtccacaactctctcccctgtaaccccttcacagctatgttctggaaagagtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgtcgtccacaactctctcccctgtaaccccttcacagctatgttctggaaagagtgga 177
Query: 61 attttctgtccctcacaagcgcttcttgtgaaaccagcaaggaaccagatggtggggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 attttctgtccctcacaagcgcttcttgtgaaaccagcaaggaaccagatggtggggaag 237
Query: 121 gccaaggggattagaattgcttgcatggctaccag 155
|||||||||||||||||||||||||||||||||||
Sbjct: 238 gccaaggggattagaattgcttgcatggctaccag 272
Score = 307 bits (155), Expect = 5e-83
Identities = 164/167 (98%)
Strand = Plus / Plus
Query: 176 tggctaccagcatccctgcctatcgagtccctgatatggagaaaaggaagctcttgaatt 235
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggctaccagcattcctgctgatcgagtccctgatatggagaaaaggaagctcttgaatt 322
Query: 236 tgcttcttcttggtgctatttcactccccagtgctggaatgcttgtcccttatgccacct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgcttcttcttggtgctatttcactccccagtgctggaatgcttgtcccttatgccacct 382
Query: 296 tcttcgcccctccagggtcaggttctgcaactggtggtactattgca 342
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcttcgcccctccagggtcaggttctgcaactggtggtactattgca 429
>gnl|LJGI|AV766170
Length = 191
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 635 atgtggttgatgggaaggtggtgtttgttccttgggtcgaaacagatttcagaactggtg 694
|||||||| |||| |||| || ||||||||||||||| | |||| |||||| |||||||
Sbjct: 185 atgtggttaatggaaagggggggtttgttccttgggtgggaacaaatttcaaaactggta 126
Query: 695 atgctccatggtgggctta 713
|||||||||||||||||||
Sbjct: 125 atgctccatggtgggctta 107