Miyakogusa Predicted Gene
- Lj3g3v2737470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2737470.1 Non Chatacterized Hit- tr|B9RDA1|B9RDA1_RICCO
Transketolase, putative OS=Ricinus communis
GN=RCOM_16,90.69,0,TRANSKETOLASE_2,Transketolase binding site;
Transketolase_N,Transketolase, N-terminal; Transket_pyr,,CUFF.45175.1
(1518 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77557 homologue to UniRef100_A7QGQ5 Cluster: Chromoso... 2882 0.0
gnl|LJGI|TC77606 homologue to UniRef100_A7QGQ5 Cluster: Chromoso... 634 0.0
gnl|LJGI|FS353586 similar to UniRef100_A7QGQ5 Cluster: Chromosom... 333 2e-90
gnl|LJGI|AV409182 homologue to UniRef100_Q94IA8 Cluster: Transke... 180 2e-44
gnl|LJGI|TC74533 similar to UniRef100_O78327 Cluster: Transketol... 105 8e-22
gnl|LJGI|FS346549 homologue to UniRef100_A0Q1B9 Cluster: Sensory... 86 7e-16
gnl|LJGI|TC67775 similar to UniRef100_Q8LE99 Cluster: Transketol... 84 3e-15
>gnl|LJGI|TC77557 homologue to UniRef100_A7QGQ5 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1804
Score = 2882 bits (1454), Expect = 0.0
Identities = 1464/1466 (99%), Gaps = 1/1466 (0%)
Strand = Plus / Plus
Query: 53 ggaagcttatagcattttatgatgacaatcacatttctattgatggtaacacagatattg 112
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1 ggaagcttatagcattttatgatgacaatcacatttctat-gatggtaacacagatatcg 59
Query: 113 cattcactgagagtgttgatagtcgttttgagggacttggatggcatgttatttgggtga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 cattcactgagagtgttgatagtcgttttgagggacttggatggcatgttatttgggtga 119
Query: 173 agaatggaaacaatggctatgatgatattcgtgctgctattaaggaagcaaaagctgtcc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 agaatggaaacaatggctatgatgatattcgtgctgctattaaggaagcaaaagctgtcc 179
Query: 233 cagacaaacccacattgatcaaggtcacaacaaccattggttttggttctcctaacaaag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cagacaaacccacattgatcaaggtcacaacaaccattggttttggttctcctaacaaag 239
Query: 293 ctaactcctacagtgtgcatggaagtgcacttggtgccaaagaagttgaagccaccagag 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctaactcctacagtgtgcatggaagtgcacttggtgccaaagaagttgaagccaccagag 299
Query: 353 cgaaccttgcatggccgcatgagcctttccatgtgcctgaggatgtcaaaaaacactgga 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgaaccttgcatggccgcatgagcctttccatgtgcctgaggatgtcaaaaaacactgga 359
Query: 413 gtcgccatatccctgagggtgctgcacttgaggctgagtggaatgccaagtttgctgaat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtcgccatatccctgagggtgctgcacttgaggctgagtggaatgccaagtttgctgaat 419
Query: 473 atgaaaagaaatacaaggaggaagctgcagagtttaagtctattattaatggtgatttac 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgaaaagaaatacaaggaggaagctgcagagtttaagtctattattaatggtgatttac 479
Query: 533 ctgctggttgggagaaagcacttccgacatacactccagagaccccagctgatgccacca 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctgctggttgggagaaagcacttccgacatacactccagagaccccagctgatgccacca 539
Query: 593 gaaatctgtctcagactaacctaaatgcccttgcaaaggttcttcctggtctgcttggtg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaaatctgtctcagactaacctaaatgcccttgcaaaggttcttcctggtctgcttggtg 599
Query: 653 gtagtgcagatcttgcttcttccaacatgaccttgctgaaaatgtttgggaacttccaaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtagtgcagatcttgcttcttccaacatgaccttgctgaaaatgtttgggaacttccaaa 659
Query: 713 aggacactccggcggagcgtaatgtcagatttggtgttagagaacatggaatgggagcta 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggacactccggcggagcgtaatgtcagatttggtgttagagaacatggaatgggagcta 719
Query: 773 tctgcaatggtattgctcttcacagccctggactgattccttactgtgcaactttctttg 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tctgcaatggtattgctcttcacagccctggactgattccttactgtgcaactttctttg 779
Query: 833 ttttcaccgactacatgagaggtgccataaggctttctgccctgtctgaggctggggtta 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttttcaccgactacatgagaggtgccataaggctttctgccctgtctgaggctggggtta 839
Query: 893 tatatgtcatgacccatgattccatagggctcggagaggatgggccaacccaccagccga 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tatatgtcatgacccatgattccatagggctcggagaggatgggccaacccaccagccga 899
Query: 953 tagagcatcttgcgagcttccgggcaatgccgaacatcctgatgcttcgtcctgcagatg 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tagagcatcttgcgagcttccgggcaatgccgaacatcctgatgcttcgtcctgcagatg 959
Query: 1013 gtaatgaaacagctggagcttacaaagttgctgtggttaacaggaagagaccctctatcc 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gtaatgaaacagctggagcttacaaagttgctgtggttaacaggaagagaccctctatcc 1019
Query: 1073 ttgccctttccaggcaaaaattgcccaatcttcctggaacttcaattgaaggagttgaaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 ttgccctttccaggcaaaaattgcccaatcttcctggaacttcaattgaaggagttgaaa 1079
Query: 1133 agggtgggtacaccatttccgacaactcaaccggcaacaagcccgatgtcattctgatcg 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 agggtgggtacaccatttccgacaactcaaccggcaacaagcccgatgtcattctgatcg 1139
Query: 1193 gaactggttctgagttggaaattgctgccaaagctgctgatgatctaagaaaggaaggga 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gaactggttctgagttggaaattgctgccaaagctgctgatgatctaagaaaggaaggga 1199
Query: 1253 aggcagttagagttgtttccttcgtctcatgggaacttttcgatgagcaatcagaagctt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 aggcagttagagttgtttccttcgtctcatgggaacttttcgatgagcaatcagaagctt 1259
Query: 1313 acaaggagagtgttctaccttccgctgtttcagctagagttagcattgaggcagggtcaa 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 acaaggagagtgttctaccttccgctgtttcagctagagttagcattgaggcagggtcaa 1319
Query: 1373 catttgggtgggagaaaattgttggaagcaaggggaaggcaataggtattgatcattttg 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 catttgggtgggagaaaattgttggaagcaaggggaaggcaataggtattgatcattttg 1379
Query: 1433 gagccagtgctcctgcggggagaatatacaaggagttcggtatcactaaggaagctgtta 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 gagccagtgctcctgcggggagaatatacaaggagttcggtatcactaaggaagctgtta 1439
Query: 1493 ttgctgcagctaaagagcttatctag 1518
||||||||||||||||||||||||||
Sbjct: 1440 ttgctgcagctaaagagcttatctag 1465
>gnl|LJGI|TC77606 homologue to UniRef100_A7QGQ5 Cluster: Chromosome chr16
scaffold_94, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 718
Score = 634 bits (320), Expect = 0.0
Identities = 611/708 (86%)
Strand = Plus / Plus
Query: 142 gagggacttggatggcatgttatttgggtgaagaatggaaacaatggctatgatgatatt 201
|||| |||||| |||||||| |||||||| ||||||||||| | ||| || ||||| |||
Sbjct: 11 gaggcacttgggtggcatgtaatttgggtaaagaatggaaatactgggtacgatgagatt 70
Query: 202 cgtgctgctattaaggaagcaaaagctgtcccagacaaacccacattgatcaaggtcaca 261
||||| || |||||||||||||| |||||| ||||||||| || |||||||||| ||
Sbjct: 71 cgtgcagccattaaggaagcaaaggctgtcaaagacaaacctaccctgatcaaggtaacc 130
Query: 262 acaaccattggttttggttctcctaacaaagctaactcctacagtgtgcatggaagtgca 321
|| |||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||
Sbjct: 131 actaccattggatttggttctccaaacaaggctaattcatacagtgttcatggaagtgca 190
Query: 322 cttggtgccaaagaagttgaagccaccagagcgaaccttgcatggccgcatgagcctttc 381
| ||||| |||||||| || || || || ||| |||| |||||| ||||| ||||||
Sbjct: 191 ttgggtgctaaagaagtggatgctactaggaagaatcttggatggccacatgaacctttc 250
Query: 382 catgtgcctgaggatgtcaaaaaacactggagtcgccatatccctgagggtgctgcactt 441
|||||||| || || || ||||| || |||||||||||| ||||||||||||||||||||
Sbjct: 251 catgtgccagaagaagttaaaaagcattggagtcgccatgtccctgagggtgctgcactt 310
Query: 442 gaggctgagtggaatgccaagtttgctgaatatgaaaagaaatacaaggaggaagctgca 501
|| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 311 gaagctgagtggaatgctaagtttgctgaatatgagaagaaatacaaggaggatgctgaa 370
Query: 502 gagtttaagtctattattaatggtgatttacctgctggttgggagaaagcacttccgaca 561
||| | || |||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 371 gagctaaaatctattattactggtgtattacctgctggttgggagaaagcactcccgaca 430
Query: 562 tacactccagagaccccagctgatgccaccagaaatctgtctcagactaacctaaatgcc 621
||||||||||| | ||| | |||||| || ||||||||||||||| || |||||||||
Sbjct: 431 tacactccagaaaaccctggtgatgctacaagaaatctgtctcagcaaaatctaaatgcc 490
Query: 622 cttgcaaaggttcttcctggtctgcttggtggtagtgcagatcttgcttcttccaacatg 681
||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 491 cttgctaaggttctccctggtctgattggtggcagtgcagatcttgcttcttccaacatg 550
Query: 682 accttgctgaaaatgtttgggaacttccaaaaggacactccggcggagcgtaatgtcaga 741
|||||| |||||| | ||| | ||||||||||| || || | ||||| ||||| ||
Sbjct: 551 accttgttgaaaagttatggagatttccaaaaggataccccagaagagcgcaatgttcga 610
Query: 742 tttggtgttagagaacatggaatgggagctatctgcaatggtattgctcttcacagccct 801
|||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 611 tttggtgttagagagcacggaatgggagcaatctgcaatggtattgctcttcacagccct 670
Query: 802 ggactgattccttactgtgcaactttctttgttttcaccgactacatg 849
||| | ||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 671 ggattcattccatattgtgcaactttctttgtcttcactgactacatg 718
>gnl|LJGI|FS353586 similar to UniRef100_A7QGQ5 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 750
Score = 333 bits (168), Expect = 2e-90
Identities = 417/500 (83%)
Strand = Plus / Minus
Query: 1009 gatggtaatgaaacagctggagcttacaaagttgctgtggttaacaggaagagaccctct 1068
|||||||||||||| || ||| | ||||||||||| ||| |||||| ||||||||||||
Sbjct: 748 gatggtaatgaaactgccggatcatacaaagttgccgtgcttaacaagaagagaccctca 689
Query: 1069 atccttgccctttccaggcaaaaattgcccaatcttcctggaacttcaattgaaggagtt 1128
|||||||||||||| ||||||| || ||| | ||||| |||||||| ||||||||||||
Sbjct: 688 atccttgccctttctcggcaaaagttaccccagcttccgggaacttctattgaaggagtt 629
Query: 1129 gaaaagggtgggtacaccatttccgacaactcaaccggcaacaagcccgatgtcattctg 1188
||||||||||| |||| |||||| ||||||||| | || |||||||| ||||| || ||
Sbjct: 628 gaaaagggtggctacatcatttcagacaactcatcaggtaacaagcctgatgtgatcttg 569
Query: 1189 atcggaactggttctgagttggaaattgctgccaaagctgctgatgatctaagaaaggaa 1248
| | ||||||||||||||||||||||| ||| |||| ||| |||||||| ||||||
Sbjct: 568 ctgagcactggttctgagttggaaattgccgccgctgctggtgaggatctaaggaaggaa 509
Query: 1249 gggaaggcagttagagttgtttccttcgtctcatgggaacttttcgatgagcaatcagaa 1308
|| || | |||||||||||||| || || ||||||||||| ||||| || |||||
Sbjct: 508 ggaaaaactgttagagttgtttcttttgttagctgggaactttttgatgaccagtcagat 449
Query: 1309 gcttacaaggagagtgttctaccttccgctgtttcagctagagttagcattgaggcaggg 1368
| ||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||
Sbjct: 448 gaatacaaggagagtgttctccctgctgctgtgacagctagagttagcattgaggcagca 389
Query: 1369 tcaacatttgggtgggagaaaattgttggaagcaaggggaaggcaataggtattgatcat 1428
||||| ||||| ||| | || ||||||||||||| || || || ||||| |||||||
Sbjct: 388 tcaacctttggttggcataagcttgttggaagcaaaggaaaagccataggcattgatcga 329
Query: 1429 tttggagccagtgctcctgcggggagaatatacaaggagttcggtatcactaaggaagct 1488
|| ||||| |||||||| || || | |||||| ||||||||||||||||| |||||||||
Sbjct: 328 ttcggagcaagtgctccagcaggaaaaatatataaggagttcggtatcaccaaggaagct 269
Query: 1489 gttattgctgcagctaaaga 1508
||||||||||| || |||||
Sbjct: 268 gttattgctgctgccaaaga 249
>gnl|LJGI|AV409182 homologue to UniRef100_Q94IA8 Cluster: Transketolase; n=1;
Persicaria tinctoria|Rep: Transketolase - Persicaria
tinctoria, partial (16%)
Length = 299
Score = 180 bits (91), Expect = 2e-44
Identities = 148/167 (88%)
Strand = Plus / Plus
Query: 16 aatgaagcatgctcacttgccggtcactggggactggggaagcttatagcattttatgat 75
|||||||||||||||||||| || |||||||| || ||||||||||| || || ||||||
Sbjct: 126 aatgaagcatgctcacttgctggccactggggtctagggaagcttattgctttatatgat 185
Query: 76 gacaatcacatttctattgatggtaacacagatattgcattcactgagagtgttgatagt 135
||||| |||||||| ||||||||| |||| || |||||||||||||||| ||||||||
Sbjct: 186 gacaaccacatttccattgatggtgacactgaaattgcattcactgagaatgttgataaa 245
Query: 136 cgttttgagggacttggatggcatgttatttgggtgaagaatggaaa 182
|||||||||| |||||| |||||||| |||||||| |||||||||||
Sbjct: 246 cgttttgaggcacttgggtggcatgtaatttgggtaaagaatggaaa 292
>gnl|LJGI|TC74533 similar to UniRef100_O78327 Cluster: Transketolase 1; n=1; Capsicum
annuum|Rep: Transketolase 1 - Capsicum annuum (Bell
pepper), partial (8%)
Length = 554
Score = 105 bits (53), Expect = 8e-22
Identities = 131/157 (83%)
Strand = Plus / Plus
Query: 1343 cagctagagttagcattgaggcagggtcaacatttgggtgggagaaaattgttggaagca 1402
|||||||||||||||||||||||| || || ||||| ||| | || |||||||||||
Sbjct: 1 cagctagagttagcattgaggcagcatccacctttggttggcataagcttgttggaagcc 60
Query: 1403 aggggaaggcaataggtattgatcattttggagccagtgctcctgcggggagaatataca 1462
| || || || ||||| |||||| || ||||| |||||||| || || | |||||| |
Sbjct: 61 aaggaaaagccataggccttgatcgattcggagcaagtgctccagcaggaaaaatatata 120
Query: 1463 aggagttcggtatcactaaggaagctgttattgctgc 1499
|||||||||||||||| ||||||||||||||||||||
Sbjct: 121 aggagttcggtatcaccaaggaagctgttattgctgc 157
>gnl|LJGI|FS346549 homologue to UniRef100_A0Q1B9 Cluster: Sensory box/GGDEF family
protein; n=1; Clostridium novyi NT|Rep: Sensory
box/GGDEF family, partial (1%)
Length = 745
Score = 85.7 bits (43), Expect = 7e-16
Identities = 117/139 (84%), Gaps = 2/139 (1%)
Strand = Plus / Minus
Query: 107 atattgcattcactgagagtgttgatagtcgttttgagggacttggatggcatgttattt 166
|||||||||||| || | ||||||||||||||||||||| |||||| ||||||| | |||
Sbjct: 742 atattgcattcagtgtgtgtgttgatagtcgttttgaggaacttgggtggcatg-tcttt 684
Query: 167 gggtgaagaatggaaacaatggctatgatgatattcgtgctgctattaaggaagcaaaag 226
||| | ||||| ||| | |||||||||||| || |||| | ||||||| ||||||||
Sbjct: 683 gggcaataaatggttacactagctatgatgatagtcatgctaccattaagg-agcaaaag 625
Query: 227 ctgtcccagacaaacccac 245
||||| ||||||||||||
Sbjct: 624 ctgtcagagacaaacccac 606
>gnl|LJGI|TC67775 similar to UniRef100_Q8LE99 Cluster: Transketolase-like protein;
n=1; Arabidopsis thaliana|Rep: Transketolase-like
protein - Arabidopsis thaliana (Mouse-ear cress),
partial (27%)
Length = 806
Score = 83.8 bits (42), Expect = 3e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atggaggggattgcaaatgaagcatgctcacttgccggtcac 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 atggaggggattgcaaatgaagcatgctcacttgccggtcac 806