Miyakogusa Predicted Gene
- Lj3g3v2737450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2737450.1 tr|G7JEN3|G7JEN3_MEDTR UDP-glucuronate
4-epimerase OS=Medicago truncatula GN=MTR_4g024600 PE=4
SV=1,94.09,0,Epimerase,NAD-dependent epimerase/dehydratase; no
description,NAD(P)-binding domain; no description,,CUFF.44587.1
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58078 similar to UniRef100_A7PYE7 Cluster: Chromosome... 1082 0.0
gnl|LJGI|TC61079 763 0.0
gnl|LJGI|TC58317 similar to UniRef100_Q9STI6 Cluster: UDP-glucur... 202 4e-51
gnl|LJGI|TC81011 similar to UniRef100_Q9LIS3 Cluster: UDP-glucur... 109 4e-23
gnl|LJGI|TC72474 similar to UniRef100_Q9STI6 Cluster: UDP-glucur... 109 4e-23
gnl|LJGI|FS334731 similar to UniRef100_Q70IJ4 Cluster: Branched-... 80 4e-14
gnl|LJGI|TC70758 similar to UniRef100_Q304Y2 Cluster: UDP-glucur... 56 6e-07
>gnl|LJGI|TC58078 similar to UniRef100_A7PYE7 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 783
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 1 atgtctcagctgaagcaaatgtcgcacaccgatagtgccccttcgacgccggggaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atgtctcagctgaagcaaatgtcgcacaccgatagtgccccttcgacgccggggaagttc 297
Query: 61 aagatggagaaggcctcctacttcaaccgcgcacggtggcacgcctcgccggcgaagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aagatggagaaggcctcctacttcaaccgcgcacggtggcacgcctcgccggcgaagctc 357
Query: 121 gccttgtggtcaatcgttttctcggcggcgatcttgatcttctttttccggtcgccggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gccttgtggtcaatcgttttctcggcggcgatcttgatcttctttttccggtcgccggcg 417
Query: 181 acgtcatctatctccgctgatccctcccggcgttccctcaggacatccaactggggcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acgtcatctatctccgctgatccctcccggcgttccctcaggacatccaactggggcggt 477
Query: 241 ccggtctgggagaagaaggttcggtcctctgccagggtccggtccaggaatggattctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ccggtctgggagaagaaggttcggtcctctgccagggtccggtccaggaatggattctcc 537
Query: 301 gttctggtcaccggcgccgcgggtttcgtcgggacacatgtgtccgccgccttgaagcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gttctggtcaccggcgccgcgggtttcgtcgggacacatgtgtccgccgccttgaagcgc 597
Query: 361 cgcggtgatggggtgctgggaattgacaacttcaatgactactatgacccttctctgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cgcggtgatggggtgctgggaattgacaacttcaatgactactatgacccttctctgaag 657
Query: 421 cgttcacgccaggccctgttggagcgtaccggggtgttcattgtggaaggtgatatcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cgttcacgccaggccctgttggagcgtaccggggtgttcattgtggaaggtgatatcaat 717
Query: 481 gatgctgcgctgttgaagaagctctttgaggttgtgccgttcacgcatgtgatgcatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gatgctgcgctgttgaagaagctctttgaggttgtgccgttcacgcatgtgatgcatttg 777
Query: 541 gctgct 546
||||||
Sbjct: 778 gctgct 783
>gnl|LJGI|TC61079
Length = 800
Score = 763 bits (385), Expect = 0.0
Identities = 385/385 (100%)
Strand = Plus / Plus
Query: 933 tcatggcaccgttgctagggattttacttacattgatgacattgtgaggggctgcttggg 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatggcaccgttgctagggattttacttacattgatgacattgtgaggggctgcttggg 60
Query: 993 tgcgttggataccgcggagaagagcactggcagtggcgggaagaagaaggggccggcgca 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttggataccgcggagaagagcactggcagtggcgggaagaagaaggggccggcgca 120
Query: 1053 gttgagggtgttcaatctggggaatacttctcctgtcccggtgagtgagcttgtgagcat 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgagggtgttcaatctggggaatacttctcctgtcccggtgagtgagcttgtgagcat 180
Query: 1113 tttggagaggctgttgaaggttaaggcgaagaggaacgtgatgaggttgccgcggaatgg 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttggagaggctgttgaaggttaaggcgaagaggaacgtgatgaggttgccgcggaatgg 240
Query: 1173 ggatgtgcagtttactcatgcaaacattagctacgcgcagagggagcttgggtataagcc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatgtgcagtttactcatgcaaacattagctacgcgcagagggagcttgggtataagcc 300
Query: 1233 tgtcacagatcttcaggctggtttgaagaaatttgtgcggtggtacctgaactactattc 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcacagatcttcaggctggtttgaagaaatttgtgcggtggtacctgaactactattc 360
Query: 1293 tggtgggaagaaagctgttgagtga 1317
|||||||||||||||||||||||||
Sbjct: 361 tggtgggaagaaagctgttgagtga 385
>gnl|LJGI|TC58317 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (89%)
Length = 1902
Score = 202 bits (102), Expect = 4e-51
Identities = 390/486 (80%)
Strand = Plus / Plus
Query: 670 tcttctagctcagtttatgggttgaatactaaggtccccttttctgagaaggataggact 729
||||||||||| ||||| ||||||||| | ||||| || || || |||||||| || ||
Sbjct: 823 tcttctagctctgtttacgggttgaattccaaggttccgttctccgagaaggacagaacg 882
Query: 730 gaccagcctgctagcttgtatgctgctactaagaaggctggtgaagagattgctcatact 789
|||||||| || || | || || || || |||||||| ||||||| ||||| || |||
Sbjct: 883 gaccagccggcgagtctctacgcggcgacgaagaaggccggtgaagcaattgcgcacact 942
Query: 790 tataaccatatatatggcctttccttgaccggtttgaggttcttcactgtttatggacct 849
|| || | || |||||| | ||| || |||||| |||||||||| || ||||| |||
Sbjct: 943 tacaataacatttatggcttatccaccactggtttgcggttcttcacggtgtatggtcct 1002
Query: 850 tggggtaggcctgacatggcctacttcttcttcactaaggatattttgaaggggaagagc 909
|||||| | ||||||||||| || ||||||||||| ||||||||| |||||||||||
Sbjct: 1003 tggggtcgacctgacatggcgtatttcttcttcaccaaggatattctgaaggggaagcag 1062
Query: 910 atccccatctttgaggctgcgaatcatggcaccgttgctagggattttacttacattgat 969
|| | ||||||| || | || ||| | ||||||||| || || || |||||||||
Sbjct: 1063 attactgtctttgaagcccctgatggtggaagcgttgctagagacttcacctacattgat 1122
Query: 970 gacattgtgaggggctgcttgggtgcgttggataccgcggagaagagcactggcagtggc 1029
|||||||||| ||| || || || || ||||||| ||| ||||||| ||||| |||||
Sbjct: 1123 gacattgtgaaggggtgtttaggggctctggatacggcgaagaagagtactggtagtgga 1182
Query: 1030 gggaagaagaaggggccggcgcagttgagggtgttcaatctggggaatacttctcctgtc 1089
|| |||||||||||||| || |||| ||| | |||||| ||||||| ||||| || ||
Sbjct: 1183 ggtaagaagaaggggcctgcacagtataggattttcaatttggggaacacttcgccggtg 1242
Query: 1090 ccggtgagtgagcttgtgagcattttggagaggctgttgaaggttaaggcgaagaggaac 1149
||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||
Sbjct: 1243 ccggtgagtgagcttgtgagcatattggagaagcttctgaaggtgaaggcgaagaggaag 1302
Query: 1150 gtgatg 1155
||||||
Sbjct: 1303 gtgatg 1308
>gnl|LJGI|TC81011 similar to UniRef100_Q9LIS3 Cluster: UDP-glucuronate 4-epimerase 6;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 6 - Arabidopsis thaliana (Mouse-ear cress),
partial (33%)
Length = 520
Score = 109 bits (55), Expect = 4e-23
Identities = 115/135 (85%)
Strand = Plus / Plus
Query: 961 tacattgatgacattgtgaggggctgcttgggtgcgttggataccgcggagaagagcact 1020
||||| |||||||| |||| ||| ||||| || || |||| || ||||||||||||||
Sbjct: 96 tacatcgatgacatcgtgaagggatgcttaggagcactggacacggcggagaagagcacc 155
Query: 1021 ggcagtggcgggaagaagaaggggccggcgcagttgagggtgttcaatctggggaatact 1080
||||| |||||||||||||||||||||||||||||||| |||| ||| || ||||| |||
Sbjct: 156 ggcagcggcgggaagaagaaggggccggcgcagttgagagtgtacaacctcgggaacact 215
Query: 1081 tctcctgtcccggtg 1095
|| || || ||||||
Sbjct: 216 tcgccggtgccggtg 230
>gnl|LJGI|TC72474 similar to UniRef100_Q9STI6 Cluster: UDP-glucuronate 4-epimerase 5;
n=1; Arabidopsis thaliana|Rep: UDP-glucuronate
4-epimerase 5 - Arabidopsis thaliana (Mouse-ear cress),
partial (25%)
Length = 590
Score = 109 bits (55), Expect = 4e-23
Identities = 142/171 (83%)
Strand = Plus / Plus
Query: 974 ttgtgaggggctgcttgggtgcgttggataccgcggagaagagcactggcagtggcggga 1033
|||||| ||| || ||||| || |||||||| ||| ||||||| ||||| ||||| || |
Sbjct: 9 ttgtgaaggggtgtttgggggctttggatacggcgaagaagagtactggtagtggaggaa 68
Query: 1034 agaagaaggggccggcgcagttgagggtgttcaatctggggaatacttctcctgtcccgg 1093
||||||||||||| || ||||| ||||| |||||| ||||||| ||||| || || ||||
Sbjct: 69 agaagaaggggccagctcagtttagggttttcaatttggggaacacttcgccggtgccgg 128
Query: 1094 tgagtgagcttgtgagcattttggagaggctgttgaaggttaaggcgaaga 1144
||| ||||||||| | || ||||||| ||| ||||||||||||| ||||
Sbjct: 129 tgactgagcttgttaagatattggagaagcttctgaaggttaaggctaaga 179
>gnl|LJGI|FS334731 similar to UniRef100_Q70IJ4 Cluster: Branched-chain amino acid
permease protein; n=1; Rhizobium etli|Rep:
Branched-chain amino acid permease protein - Rhizobium
etli, partial (17%)
Length = 808
Score = 79.8 bits (40), Expect = 4e-14
Identities = 119/142 (83%), Gaps = 5/142 (3%)
Strand = Plus / Plus
Query: 567 tatggagaatcctggctcttatgtgcatagtaacattgctggttttgtcaatttgcttga 626
|||||||||||| |||||| || |||| ||| |||||||||||||||||||| | | |
Sbjct: 276 tatggagaatcccggctct---gttcatactaaaattgctggttttgtcaatttacctta 332
Query: 627 ggtttgtaagactgtgaaccctcaacctgctattgtgtgggctt-cttctagctcagttt 685
||||||||||||| |||| |||||| | ||||||||| || ||||||||||||| |
Sbjct: 333 ggtttgtaagactatgaagcctcaa-ttactattgtgtcaatttgcttctagctcagtat 391
Query: 686 atgggttgaatactaaggtccc 707
| |||||||||||||||||||
Sbjct: 392 aaaggttgaatactaaggtccc 413
>gnl|LJGI|TC70758 similar to UniRef100_Q304Y2 Cluster: UDP-glucuronic acid 4-epimerase;
n=1; Zea mays|Rep: UDP-glucuronic acid 4-epimerase - Zea
mays (Maize), partial (94%)
Length = 2248
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1105 gtgagcattttggagaggctgttgaaggttaaggcgaagaggaacgtg 1152
||||| ||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 1250 gtgagtattttggaggggcatttgaaggtgaaggcgaagaggaacgtg 1297