Miyakogusa Predicted Gene

Lj3g3v2737370.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2737370.1 Non Chatacterized Hit- tr|F6HZK7|F6HZK7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.07,0.000000000001,VHS,VHS; no description,ENTH/VHS,CUFF.44543.1
         (234 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596048 similar to UniRef100_A7Q1S7 Cluster: Chromosom...    66   1e-10
gnl|LJGI|TC72578 similar to UniRef100_A7Q1S7 Cluster: Chromosome...    66   1e-10
gnl|LJGI|TC63257 similar to UniRef100_A7Q1S7 Cluster: Chromosome...    66   1e-10

>gnl|LJGI|BW596048 similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 479

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 62  ctgaagttgcttctcagaagcttcatgaggacttggttcggttggttgataac 114
           ||||||| |||||| ||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 333 ctgaagtggcttctgagaagcttcttgaggacatggttcggttgattgataac 385


>gnl|LJGI|TC72578 similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 749

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 62  ctgaagttgcttctcagaagcttcatgaggacttggttcggttggttgataac 114
           ||||||| |||||| ||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 562 ctgaagtggcttctgagaagcttcttgaggacatggttcggttgattgataac 614


>gnl|LJGI|TC63257 similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 1523

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 62  ctgaagttgcttctcagaagcttcatgaggacttggttcggttggttgataac 114
           ||||||| |||||| ||||||||| ||||||| ||||||||||| ||||||||
Sbjct: 486 ctgaagtggcttctgagaagcttcttgaggacatggttcggttgattgataac 538