Miyakogusa Predicted Gene
- Lj3g3v2721420.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2721420.3 Non Chatacterized Hit- tr|I1J953|I1J953_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.2,0,SUBFAMILY NOT
NAMED,NULL; AUTOPHAGY PROTEIN 16-LIKE,NULL; seg,NULL,CUFF.44492.3
(2010 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78980 similar to UniRef100_UPI0000196FB7 Cluster: tra... 291 9e-78
gnl|LJGI|TC68858 similar to UniRef100_A7R1F1 Cluster: Chromosome... 276 5e-73
>gnl|LJGI|TC78980 similar to UniRef100_UPI0000196FB7 Cluster: transducin family protein
/ WD-40 repeat family protein; n=1; Arabidopsis
thaliana|Rep: transducin family protein / WD-40 repeat
family protein - Arabidopsis thaliana, partial (5%)
Length = 418
Score = 291 bits (147), Expect = 9e-78
Identities = 278/323 (86%), Gaps = 9/323 (2%)
Strand = Plus / Plus
Query: 1124 ttcaacaacctggggttcccattgagcccatgggactacctgatggtggtgtcccaccac 1183
|||||||||||| ||||| || ||| |||| ||||| ||||||||||||||||| || |
Sbjct: 96 ttcaacaacctgctgttccaatcgagtccataggacttcctgatggtggtgtccctccgc 155
Query: 1184 aatcctcagctcaggctgcagtcatgcccacatcacagctgcaggc---------accaa 1234
|||||||||| ||||||| ||||||||| ||| ||| ||||||| || |
Sbjct: 156 aatcctcagcacaggctgtggtcatgccccaatctcagttgcaggctgctcaggcacaat 215
Query: 1235 tttctagccagcctcttgatcttagtgtccttggagtaccaaattctgctgattcaggaa 1294
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 216 tttctagccaacctcttgatcttagtgtacttggagtaccaaattctgctgattcaggga 275
Query: 1295 agcctccacaaactggttctccaccatcttctctacgacttggacaggttccacgagggg 1354
||||| |||||| | ||||| |||| |||| ||| | |||||||||||| || ||||
Sbjct: 276 agccttcacaaagtagttctgcaccggtttctgtacatcctggacaggttccccgtgggg 335
Query: 1355 ctgctgcttctgtatgtttcaagactggacttgctcaccttgagctaaatcatctttcag 1414
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 336 ctgctgcttctgtatgtttcaagattggacttgctcaccttgagctaaataatctttcag 395
Query: 1415 atgcattgtcttgctttgatgaa 1437
|||||||||||||||||||||||
Sbjct: 396 atgcattgtcttgctttgatgaa 418
>gnl|LJGI|TC68858 similar to UniRef100_A7R1F1 Cluster: Chromosome undetermined
scaffold_349, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_349, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(52%)
Length = 678
Score = 276 bits (139), Expect = 5e-73
Identities = 298/351 (84%)
Strand = Plus / Plus
Query: 1659 tcgaactgccataaaacgaaacatggaggtgcaaaattatgcatattccaagcaaatgct 1718
|||||||||||| ||| ||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 1 tcgaactgccatcaaaagaaacatggaggtccagaattatgcatattcaaagcaaatgct 60
Query: 1719 agaactactattgtctaaagcacctgcaagcaagcaggatgaatttaggtgcctgatcga 1778
|||||||||||| | ||||| ||| |||||||||| || |||||||| | |||| ||
Sbjct: 61 agaactactatttaccaaagcgcctccaagcaagcaagaggaatttagaaccttgattga 120
Query: 1779 tttgtgtgttcagaggggtttgactaacaagtccattgatccactaaaagatcattctca 1838
||||||||||||||||||||||||| || ||||||||||| | |||||| || ||
Sbjct: 121 cctgtgtgttcagaggggtttgactaataaatccattgatcccttggaagatccctcaca 180
Query: 1839 tttctgcgctgccacattaagcaggctatcgaccattggatatgatgtctgtgatctatg 1898
||||| ||||||| ||||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 181 gttctgttctgccactttaagcaggctttcaaccattggatatgatgtctgtgatctctg 240
Query: 1899 tggagccaaattttcagccgtgaatgctcctggatgcgtcatctgtggaatgggaagcat 1958
||||||||||||||||| |||| ||| || |||||| | ||||||||||||| |||||
Sbjct: 241 cggagccaaattttcagcagtgactgcacccggatgcattgtctgtggaatgggtagcat 300
Query: 1959 caaaagatcagatgcactcacaggtccagctccttctccatttggttgagt 2009
||||||||||||||| | |||| |||| | |||| || |||||||||||
Sbjct: 301 caaaagatcagatgctgttgcaggaccagtttcttcaccgtttggttgagt 351