Miyakogusa Predicted Gene

Lj3g3v2720280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2720280.1 tr|G7JFF5|G7JFF5_MEDTR Synaptotagmin-1
OS=Medicago truncatula GN=MTR_4g115660 PE=4
SV=1,40.54,0.00000000002,C2DOMAIN,C2 domain; C2,C2 membrane targeting
protein; C2 domain (Calcium/lipid-binding domain, CaLB),CUFF.44506.1
         (885 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71313 similar to UniRef100_A7PY44 Cluster: Chromosome...   107   1e-22

>gnl|LJGI|TC71313 similar to UniRef100_A7PY44 Cluster: Chromosome chr15 scaffold_37,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_37, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 690

 Score =  107 bits (54), Expect = 1e-22
 Identities = 217/269 (80%), Gaps = 3/269 (1%)
 Strand = Plus / Plus

                                                                       
Query: 610 gggtccggtgttggactggttggtaccggtgtgcttgctggcgctgggctcgtggggacc 669
           ||||| ||||||||| |||||||||| |||||   |||||| || ||||| ||||| | |
Sbjct: 66  gggtctggtgttggaatggttggtactggtgttgctgctggtgccgggcttgtgggaagc 125

                                                                       
Query: 670 ggcatcggtgctggagccgggctggtggggagcggcattggcgcgggagccgggtttgtt 729
           ||||| ||||||||||||||||| || || ||||||||||| || ||||  ||| |||||
Sbjct: 126 ggcattggtgctggagccgggcttgttggcagcggcattggtgctggagttgggattgtt 185

                                                                       
Query: 730 gggagcggtctcggagcctttggtagcggactgagcaaggcggggaagttcatgggaagg 789
           || || ||||||||  |  | ||||| |||||||||| ||| || ||||||||||| || 
Sbjct: 186 ggaagtggtctcggttctgtcggtagtggactgagcagggctggtaagttcatggggaga 245

                                                                       
Query: 790 acaatcacgggaagtcatagtgcctccaggaggagtggttcttctactccagtccataat 849
           || ||||| ||  | ||  |||  ||||| |||||||||||||||||||| |||  ||||
Sbjct: 246 acgatcacagg--gcca-ggtgtatccagaaggagtggttcttctactcctgtcgctaat 302

                                        
Query: 850 gcacaggagaatggtggtggtgcaaagcc 878
               ||||||||| ||||||||| |||||
Sbjct: 303 tttgaggagaatgatggtggtgcgaagcc 331