Miyakogusa Predicted Gene

Lj3g3v2719900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2719900.1 Non Chatacterized Hit- tr|I1KGG0|I1KGG0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53919
PE,90.29,0,seg,NULL; Branch,Glycosyl transferase, family 14; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.44467.1
         (1146 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343013 weakly similar to UniRef100_A7P6V8 Cluster: Ch...   414   e-115
gnl|LJGI|GO036983 similar to UniRef100_A7P4H4 Cluster: Chromosom...    58   1e-07

>gnl|LJGI|FS343013 weakly similar to UniRef100_A7P6V8 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 753

 Score =  414 bits (209), Expect = e-115
 Identities = 209/209 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagtctaggttggaggaagggaaggaccctggtgtgataagaactagtccttctagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atgcagtctaggttggaggaagggaaggaccctggtgtgataagaactagtccttctagg 604

                                                                       
Query: 61  ccattccctgtgagacttctgcaattcttcttgctatttttggttattggcttgggtggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ccattccctgtgagacttctgcaattcttcttgctatttttggttattggcttgggtggt 664

                                                                       
Query: 121 ttctttcttagcatgtacatgattaggcatttcggtattcacaatgtggctctggtacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttctttcttagcatgtacatgattaggcatttcggtattcacaatgtggctctggtacaa 724

                                        
Query: 181 tctacgttcaggccttgcgtccagcagcc 209
           |||||||||||||||||||||||||||||
Sbjct: 725 tctacgttcaggccttgcgtccagcagcc 753


>gnl|LJGI|GO036983 similar to UniRef100_A7P4H4 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (38%)
          Length = 684

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 919 ttggcaaataggagcctcacttatgtggactggtctaggggtggtgcccacccagctacc 978
           ||||||||||||||| | ||||  ||||||||||| || ||||| || ||||| ||||||
Sbjct: 244 ttggcaaataggagcattacttgggtggactggtccagaggtggagctcaccctgctacc 303

                
Query: 979 tttgg 983
           |||||
Sbjct: 304 tttgg 308