Miyakogusa Predicted Gene

Lj3g3v2719890.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2719890.1 Non Chatacterized Hit- tr|Q4YNV9|Q4YNV9_PLABA
Putative uncharacterized protein (Fragment) OS=Plasmod,51.35,4,
,CUFF.44464.1
         (183 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79067 similar to UniRef100_Q0GXX4 Cluster: Auxin conj...    70   5e-12
gnl|LJGI|TC68353 similar to UniRef100_Q0GXX4 Cluster: Auxin conj...    66   8e-11
gnl|LJGI|TC57313 similar to UniRef100_Q0GXX4 Cluster: Auxin conj...    56   7e-08

>gnl|LJGI|TC79067 similar to UniRef100_Q0GXX4 Cluster: Auxin conjugate hydrolase;
           n=1; Medicago truncatula|Rep: Auxin conjugate hydrolase
           - Medicago truncatula (Barrel medic), partial (12%)
          Length = 485

 Score = 69.9 bits (35), Expect = 5e-12
 Identities = 73/86 (84%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                       
Query: 31  agagattatcatactcttacaagtggaaattctaacttgagggcaggctggaagcttgta 90
           |||||||||||||||| |||||||||||||||||||||      |||||||||| | |||
Sbjct: 350 agagattatcatactcatacaagtggaaattctaactt------aggctggaagttggta 297

                                     
Query: 91  attgttaataacagttataattcatc 116
           ||  |||||||||  |||||||||||
Sbjct: 296 atgattaataacatctataattcatc 271


>gnl|LJGI|TC68353 similar to UniRef100_Q0GXX4 Cluster: Auxin conjugate hydrolase;
           n=1; Medicago truncatula|Rep: Auxin conjugate hydrolase
           - Medicago truncatula (Barrel medic), partial (22%)
          Length = 572

 Score = 65.9 bits (33), Expect = 8e-11
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 78  ctggaagcttgtaattgttaataacagttataattcatcacgatatttc 126
           |||||||||| ||||  ||||||||| ||||||||||||||||||||||
Sbjct: 423 ctggaagcttataatgattaataacaattataattcatcacgatatttc 375


>gnl|LJGI|TC57313 similar to UniRef100_Q0GXX4 Cluster: Auxin conjugate hydrolase;
           n=1; Medicago truncatula|Rep: Auxin conjugate hydrolase
           - Medicago truncatula (Barrel medic), partial (49%)
          Length = 993

 Score = 56.0 bits (28), Expect = 7e-08
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 75  aggctggaagcttgtaattgttaataacagttataattcatcacgatatttc 126
           |||||||||||||  |||  |||| |||||||||||||||||||||| ||||
Sbjct: 879 aggctggaagcttacaatgattaaaaacagttataattcatcacgatttttc 828