Miyakogusa Predicted Gene
- Lj3g3v2706660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2706660.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.97,5e-17,PWWP,PWWP; seg,NULL;
Tudor/PWWP/MBT,NULL,NODE_50711_length_2641_cov_32.661114.path2.1
(2226 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59290 similar to UniRef100_A7P6U9 Cluster: Chromosome... 1170 0.0
gnl|LJGI|FS356501 similar to UniRef100_A7P6U9 Cluster: Chromosom... 182 6e-45
>gnl|LJGI|TC59290 similar to UniRef100_A7P6U9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 775
Score = 1170 bits (590), Expect = 0.0
Identities = 590/590 (100%)
Strand = Plus / Plus
Query: 1 atgggtagctcgggagagaacggaatcgatgcatcggagggtgggttggtctgggtccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atgggtagctcgggagagaacggaatcgatgcatcggagggtgggttggtctgggtccgc 245
Query: 61 cgccgtaacgggtcgtggtggcctggccggataatgggtctgcacgagctgtcggagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgccgtaacgggtcgtggtggcctggccggataatgggtctgcacgagctgtcggagagt 305
Query: 121 tccttggtttctccgagatcggggactcctgttaagctcttgggtcgcgaggacgcaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tccttggtttctccgagatcggggactcctgttaagctcttgggtcgcgaggacgcaagc 365
Query: 181 gtggattggtataatcttgaaagatcgaagcgggttaaaccttttcgatgcggggagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtggattggtataatcttgaaagatcgaagcgggttaaaccttttcgatgcggggagtat 425
Query: 241 gatgattgcattgaaaaggcaaaggcatctgctgccagctcaaataagaaagcagtgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatgattgcattgaaaaggcaaaggcatctgctgccagctcaaataagaaagcagtgaaa 485
Query: 301 tatgctcgcagggaagatgctattcttcatgctcttgagctggagagtgctcgcctcggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tatgctcgcagggaagatgctattcttcatgctcttgagctggagagtgctcgcctcggc 545
Query: 361 aaggagtcgttaaacttctgctctagatcagatacattaggtggtgaacctgttggtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaggagtcgttaaacttctgctctagatcagatacattaggtggtgaacctgttggtttg 605
Query: 421 gctggagaatcaccgatcatatcttgttctggtgaggataatgaagacttggctgatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gctggagaatcaccgatcatatcttgttctggtgaggataatgaagacttggctgatgat 665
Query: 481 ctgtctgactctgaagacaactctaattcatcccttgaattgcatcagtctgaaatatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctgtctgactctgaagacaactctaattcatcccttgaattgcatcagtctgaaatatca 725
Query: 541 cttgaagagccaaatcaaaatggttcttccaagatgcagtctttgcaggg 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 cttgaagagccaaatcaaaatggttcttccaagatgcagtctttgcaggg 775
>gnl|LJGI|FS356501 similar to UniRef100_A7P6U9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 648
Score = 182 bits (92), Expect = 6e-45
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 2110 tctggtctactaaataagaagactcgaaagctgtcctcgctgactgggcaaaagaaatca 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tctggtctactaaataagaagactcgaaagctgtcctcgctgactgggcaaaagaaatca 574
Query: 2170 gaacggaagaaggttggtacgcctgtcgtagc 2201
||||||||||||||||||||||||||||||||
Sbjct: 573 gaacggaagaaggttggtacgcctgtcgtagc 542