Miyakogusa Predicted Gene
- Lj3g3v2693310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2693310.1 Non Chatacterized Hit- tr|E0VPJ7|E0VPJ7_PEDHC
Putative uncharacterized protein OS=Pediculus humanus ,26.19,3e-18,RNA
recognition motif,RNA recognition motif domain; RNA-binding domain,
RBD,NULL; RRM,RNA recognitio,CUFF.44440.1
(807 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73082 similar to UniRef100_A7P6T3 Cluster: Chromosome... 1592 0.0
>gnl|LJGI|TC73082 similar to UniRef100_A7P6T3 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (81%)
Length = 1411
Score = 1592 bits (803), Expect = 0.0
Identities = 806/807 (99%)
Strand = Plus / Plus
Query: 1 atggatcagcagccattcgacccgtatttcctgtaccaacaagacgagcgaagcaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atggatcagcagccattcgacccgtatttcctgtaccaacaagacgagcgaagcaacatc 382
Query: 61 aacacactcttcgtctccggtctcccagacgacgtgaaagcccgtgaaatccacaacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aacacactcttcgtctccggtctcccagacgacgtgaaagcccgtgaaatccacaacctc 442
Query: 121 ttccgccgccgccctggcttcgactcttgccagctcaagtacaccggccgcgccaaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttccgccgccgccctggcttcgactcttgccagctcaagtacaccggccgcgccaaccag 502
Query: 181 gtcgttgctttcgctacgtttttcaaccaccaatcagcaatggcagcgttgcacgcccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtcgttgctttcgctacgtttttcaaccaccaatcagcaatggcagcgttgcacgcccta 562
Query: 241 aatggtgtgaaatttgaccctcaaactggatctgttttacatattgaacttgcaaggtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatggtgtgaaatttgaccctcaaactggatctgttttacatattgaacttgcaaggtca 622
Query: 301 aactccaggaggaaacgtaagccaggtggtggagcctacgtggttatagataaaaggtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aactccaggaggaaacgtaagccaggtggtggagcctacgtggttatagataaaaggtca 682
Query: 361 aaaggggagactaatgttcaggaatcatcgagtgatgatggtgaaagtgaccctgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaaggggagactaatgttcaggaatcatcgagtgatgatggtgaaagtgaccctgatgaa 742
Query: 421 ccatcggaaagtggagacaaccatggtgatttagcaaccacgcaaagtggagagactgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccatcggaaagtggagacaaccatggtgatttagcaaccacgcaaagtggagagactgct 802
Query: 481 gttggttctgacagtgctgtacctctgggaagtgagcaacatgaaaagggtggtggtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gttggttctgacagtgctgtacctctgggaagtgagcaacatgaaaagggtggtggtgat 862
Query: 541 ggagggccatgttctactctctttattgcaaatctgggtcctaactgcactgaggatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ggagggccatgttctactctctttattgcaaatctgggtcctaactgcactgaggatgaa 922
Query: 601 ttgaagcaagctttatctgtatatactggattcaacatggtcaaaatgcgttctagagga 660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 923 ttgaagcaagctttatctgtatatactggattcaacatggtccaaatgcgttctagagga 982
Query: 661 ggaatgcctgttgcatttgctgattttgaggaaattgatcaagctactaaggtcttggag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 ggaatgcctgttgcatttgctgattttgaggaaattgatcaagctactaaggtcttggag 1042
Query: 721 gagcttcagggcagctctttgccatcatcagatcggggtggcatgcacatagagtatgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 gagcttcagggcagctctttgccatcatcagatcggggtggcatgcacatagagtatgca 1102
Query: 781 aggtctaaaatgaggaagcgttagaag 807
|||||||||||||||||||||||||||
Sbjct: 1103 aggtctaaaatgaggaagcgttagaag 1129