Miyakogusa Predicted Gene
- Lj3g3v2693080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2693080.1 Non Chatacterized Hit- tr|I1KGC3|I1KGC3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.3,0,seg,NULL;
EMP70,Nonaspanin (TM9SF); TRANSMEMBRANE 9 SUPERFAMILY
PROTEIN,Nonaspanin (TM9SF),CUFF.45006.1
(1114 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromoso... 1181 0.0
gnl|LJGI|BF177678 similar to UniRef100_A9RRP5 Cluster: Predicted... 379 e-104
gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome... 121 1e-26
gnl|LJGI|BP049403 similar to UniRef100_UPI00015A6AB1 Cluster: RN... 62 8e-09
>gnl|LJGI|TC63961 homologue to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 980
Score = 1181 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 519 ttttggaacaatgttcgctctagtctgcctatggtttggtatttcagtgcccttggtctt 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttggaacaatgttcgctctagtctgcctatggtttggtatttcagtgcccttggtctt 60
Query: 579 tgtgggcagttacttgggttttaaaaaaccagcaattgaagaccctgtgaagactaataa 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgggcagttacttgggttttaaaaaaccagcaattgaagaccctgtgaagactaataa 120
Query: 639 aattcctaggcaggtacctgagcaggcatggtacatgacacccgtcttctctattcttat 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattcctaggcaggtacctgagcaggcatggtacatgacacccgtcttctctattcttat 180
Query: 699 tggtggcattcttccatttggtgcagtgttcatcgagctcttctttatcctgacatcaat 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtggcattcttccatttggtgcagtgttcatcgagctcttctttatcctgacatcaat 240
Query: 759 atggctaaaccagttctactacatctttggcttccttttcatagtgtttgttatcctatt 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggctaaaccagttctactacatctttggcttccttttcatagtgtttgttatcctatt 300
Query: 819 gatcacctgtgcagagattacggttgtgctttgctacttccaattgtgcagtgaagacta 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcacctgtgcagagattacggttgtgctttgctacttccaattgtgcagtgaagacta 360
Query: 879 caactggtggtggagagcttaccttactgctggatcctcagctctgtacctcttccttta 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caactggtggtggagagcttaccttactgctggatcctcagctctgtacctcttccttta 420
Query: 939 ctcaattttctatttcttcactaagttggagattacaaagctggtctcgggcatccttta 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcaattttctatttcttcactaagttggagattacaaagctggtctcgggcatccttta 480
Query: 999 ctttggatatatggtaattggttcatatgccttctttgtgttgactggaactattggctt 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctttggatatatggtaattggttcatatgccttctttgtgttgactggaactattggctt 540
Query: 1059 ctatgcttgcttctggtttgtccgcaagatctactcttctgtgaagattgactgat 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctatgcttgcttctggtttgtccgcaagatctactcttctgtgaagattgactgat 596
>gnl|LJGI|BF177678 similar to UniRef100_A9RRP5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(11%)
Length = 211
Score = 379 bits (191), Expect = e-104
Identities = 206/211 (97%)
Strand = Plus / Plus
Query: 293 tatctccgtccaatcggggtggtctcatgactgcaatggttctattgtgggtttttatgg 352
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 1 tatctccgtccaatcggggtggtctcatgactgcaacggttctattgtgggttttcatgg 60
Query: 353 gtttatttgctggctactcctcagcacgtttgtacaagatgttcaagggcacagagtgga 412
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 61 gtttatttgctggctactcctcagcacgtttgtacaagatgtccaagggcacacagtgga 120
Query: 413 agaggaataccttaaaaactgcatttatgtttccaggcatacttttcgctatcttctttg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggaataccttaaaaactgcatttatgtttccaggcatacttttcgctatcttctttg 180
Query: 473 tgctgaatgctttaatctggggggaaaagtc 503
||||||||||| |||||||||||||||||||
Sbjct: 181 tgctgaatgctctaatctggggggaaaagtc 211
>gnl|LJGI|TC58376 similar to UniRef100_A7P650 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (97%)
Length = 2158
Score = 121 bits (61), Expect = 1e-26
Identities = 202/249 (81%)
Strand = Plus / Plus
Query: 1 atgaatgatgatcagatccactggttttctatcataaactctctgatgattgtgcttttc 60
||||||||||| || ||||||||||| || || | ||||| | |||||||| || |||
Sbjct: 867 atgaatgatgaccaaatccactggttctcaattgttaactccttaatgattgttctcttc 926
Query: 61 ctttctggaatggtggcaatgatcatgatgaggactctttacagagacattgccaattat 120
||||| || |||||||||||||| ||| || |||| || ||| | |||||||| || |||
Sbjct: 927 ctttcgggcatggtggcaatgattatgctgcggaccctgtaccgtgacattgcaaaatat 986
Query: 121 aaccagctagaaacccaagatgaggcccaagaagaaacagggtggaaacttgttcatgga 180
|| |||| |||||||| || || ||||||||||| || || ||||||||||| |||||
Sbjct: 987 aatgagcttgaaacccaggaagaagcccaagaagagactggttggaaacttgtccatggg 1046
Query: 181 gatgttttcagggcaccagtcaattcaaatttgctttgtgtttatgttggtactggtgtt 240
||||| || ||| | || ||| ||| ||||||| |||||||||||||| ||||| |||
Sbjct: 1047 gatgtctttaggccgcctagcaactcagatttgctgtgtgtttatgttgggactggcgtt 1106
Query: 241 cagatcttt 249
||| |||||
Sbjct: 1107 cagttcttt 1115
Score = 97.6 bits (49), Expect = 1e-19
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 622 cctgtgaagactaataaaattcctaggcaggtacctgagcaggcatggtacatgacaccc 681
||||||||||| || ||||| || |||||| ||||||||||||| |||||||||| ||
Sbjct: 1488 cctgtgaagacaaacaaaatcccaaggcagatacctgagcaggcctggtacatgaaccca 1547
Query: 682 gtcttctctattcttattggtggcattcttccatttggtgcagtgttcatcgagctcttc 741
|||||||| || | ||||| || || || ||||| || || || ||||| ||||| |||
Sbjct: 1548 gtcttctcagttttgattgggggaatactcccattcggagctgttttcattgagcttttc 1607
Query: 742 tttatcctgacatcaatatggctaaaccagttctactacatctttggcttcct 794
|| ||||| || ||||| ||| |||| ||||| |||||||||||||| |||||
Sbjct: 1608 ttcatccttacctcaatctggttaaatcagttttactacatctttgggttcct 1660
>gnl|LJGI|BP049403 similar to UniRef100_UPI00015A6AB1 Cluster: RNA-binding protein
MEX3D (RING finger and KH domain-containing protein 1),
partial (3%)
Length = 619
Score = 61.9 bits (31), Expect = 8e-09
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 830 cagagattacggttgtgctttgctactt-ccaattgtgcagtg 871
|||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 619 cagagattacggttgtgctttgctacttnccaattgcgcagtg 577