Miyakogusa Predicted Gene

Lj3g3v2692920.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2692920.2 Non Chatacterized Hit- tr|I3T6F0|I3T6F0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.58,0,seg,NULL;
no description,NULL; CHAPERONINS_CPN60,Chaperonin Cpn60, conserved
site; coiled-coil,NULL;,CUFF.44407.2
         (1140 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75543 similar to UniRef100_A7P6R8 Cluster: Chromosome...  1142   0.0  
gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin...   486   e-136
gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperoni...    66   5e-10

>gnl|LJGI|TC75543 similar to UniRef100_A7P6R8 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (37%)
          Length = 891

 Score = 1142 bits (576), Expect = 0.0
 Identities = 645/664 (97%), Gaps = 6/664 (0%)
 Strand = Plus / Plus

                                                                        
Query: 477  tgtctccatcgatgacactatcattctacatggtggtggggataagaagctcattgaaga 536
            |||||||||||||||||||||||| ||||||||||   |||||| ||||||||| |||||
Sbjct: 1    tgtctccatcgatgacactatcat-ctacatggtgt--gggata-gaagctcat-gaaga 55

                                                                        
Query: 537  gagatgcgaggagcttaggacagctatggacaagagttctgcgacgtttgataaagaaaa 596
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 56   gagatgcgaggagcttaggacagctatggacaagagt-ctgcgacgtttgataaagaaaa 114

                                                                        
Query: 597  agcacaagaacgactttcaaaactctctggtggtgttgctgttttcaaagttnnnnnnnc 656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 115  agcacaagaacgactttcaaaactctctggtggtgttgctgttttcaaagttgggggggc 174

                                                                        
Query: 657  tagtgagtcagaagtcggggaaaggaaagatagagtgacagatgcgttaaatgccacaag 716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175  tagtgagtcagaagtcggggaaaggaaagatagagtgacagatgcgttaaatgccacaag 234

                                                                        
Query: 717  agcagcggtagaggagggtattgttccaggtggtggagtcgctctcttatatgctaccaa 776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235  agcagcggtagaggagggtattgttccaggtggtggagtcgctctcttatatgctaccaa 294

                                                                        
Query: 777  agtcttggagaaccttgaaactaaaaacgaggatgagaaaagaggagtacagattattca 836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295  agtcttggagaaccttgaaactaaaaacgaggatgagaaaagaggagtacagattattca 354

                                                                        
Query: 837  gaacgcacttaaggctcctacagtcacaatagctgcaaatgctggttttgatggttcttt 896
            ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 355  gaacgcacttaaggctcctacagtcaccatagttgcaaatgctggttttgatggttcttt 414

                                                                        
Query: 897  ggttcaaaacaaattgttggaacaggatgatcataatttgggttttgatgctgctaaagg 956
            |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 415  ggttcaaaaccaattgttggaacaggatgatcataatttgggttttgatgctgctacagg 474

                                                                        
Query: 957  aacctatgttgatatggtgaaggctggaattatagatcctctgaaagttgttagaacagc 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475  aacctatgttgatatggtgaaggctggaattatagatcctctgaaagttgttagaacagc 534

                                                                        
Query: 1017 tctggtagatgctgccagtgtgtcattgctacttacgaccatggaggcagctgtggtgga 1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535  tctggtagatgctgccagtgtgtcattgctacttacgaccatggaggcagctgtggtgga 594

                                                                        
Query: 1077 gaacccgaataacaaaaataaatcgccaagcccggtagcggatatggatgatttggacta 1136
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595  gaacccgaataaccaaaataaatcgccaagcccggtagcggatatggatgatttggacta 654

                
Query: 1137 ttaa 1140
            ||||
Sbjct: 655  ttaa 658


>gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin CPN60-like 2,
            mitochondrial precursor; n=2; Brassicaceae|Rep:
            Chaperonin CPN60-like 2, mitochondrial precursor -
            Arabidopsis thaliana (Mouse-ear cress), partial (55%)
          Length = 1212

 Score =  486 bits (245), Expect = e-136
 Identities = 245/245 (100%)
 Strand = Plus / Plus

                                                                        
Query: 239  gaccactcctagttgttgcggaagatgttgaaagtgatgcattggctatgctcatactca 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968  gaccactcctagttgttgcggaagatgttgaaagtgatgcattggctatgctcatactca 1027

                                                                        
Query: 299  acaagcatcatgctgggcttaaggtttgtgccataaaagctcctggctttggggatagca 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 acaagcatcatgctgggcttaaggtttgtgccataaaagctcctggctttggggatagca 1087

                                                                        
Query: 359  gaaaagcaaatttagatgaccttgcaattcttactggaggagaggtcatcacggaagatc 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 gaaaagcaaatttagatgaccttgcaattcttactggaggagaggtcatcacggaagatc 1147

                                                                        
Query: 419  gcggttttactcttgacaaagtccaaccagaattgcttggcactgcaaaaaaggttactg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 gcggttttactcttgacaaagtccaaccagaattgcttggcactgcaaaaaaggttactg 1207

                 
Query: 479  tctcc 483
            |||||
Sbjct: 1208 tctcc 1212



 Score =  402 bits (203), Expect = e-111
 Identities = 227/231 (98%), Gaps = 3/231 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaaagtcgggaaggaaggaataatcactgttgctgacggaaatacgttagagaac 60
           |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||| |
Sbjct: 643 atggagaaagtcgggaaggaag-aataatcactgttgctgacggaa-tacgtttgaga-c 699

                                                                       
Query: 61  gagttggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gagttggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttatt 759

                                                                       
Query: 121 actgatcagaagacccagaaatgtgaattggagaacccctttatcctcatccatgacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 actgatcagaagacccagaaatgtgaattggagaacccctttatcctcatccatgacaag 819

                                                              
Query: 181 aaaatttcagacataaattcactgttgaaaatattggagctggcagtcacg 231
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aaaatttcagacataaattcactgttgaaaatattggagctggcagtcacg 870


>gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperonin CPN60,
           mitochondrial precursor; n=1; Brassica napus|Rep:
           Chaperonin CPN60, mitochondrial precursor - Brassica
           napus (Rape), partial (15%)
          Length = 702

 Score = 65.9 bits (33), Expect = 5e-10
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 65  tggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttattactg 124
           ||||||| || |||||||||||||  |  || |||||||||||||||||||| || ||  
Sbjct: 368 tggaagtagttgaaggaatgaagcctgacaggggctacatatctccttatttcataacaa 427

                                        
Query: 125 atcagaagacccagaaatgtgaattggag 153
           ||||||||| ||||||| ||||| |||||
Sbjct: 428 atcagaagaaccagaaacgtgaactggag 456