Miyakogusa Predicted Gene
- Lj3g3v2692920.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2692920.2 Non Chatacterized Hit- tr|I3T6F0|I3T6F0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.58,0,seg,NULL;
no description,NULL; CHAPERONINS_CPN60,Chaperonin Cpn60, conserved
site; coiled-coil,NULL;,CUFF.44407.2
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75543 similar to UniRef100_A7P6R8 Cluster: Chromosome... 1142 0.0
gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin... 486 e-136
gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperoni... 66 5e-10
>gnl|LJGI|TC75543 similar to UniRef100_A7P6R8 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (37%)
Length = 891
Score = 1142 bits (576), Expect = 0.0
Identities = 645/664 (97%), Gaps = 6/664 (0%)
Strand = Plus / Plus
Query: 477 tgtctccatcgatgacactatcattctacatggtggtggggataagaagctcattgaaga 536
|||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||
Sbjct: 1 tgtctccatcgatgacactatcat-ctacatggtgt--gggata-gaagctcat-gaaga 55
Query: 537 gagatgcgaggagcttaggacagctatggacaagagttctgcgacgtttgataaagaaaa 596
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 56 gagatgcgaggagcttaggacagctatggacaagagt-ctgcgacgtttgataaagaaaa 114
Query: 597 agcacaagaacgactttcaaaactctctggtggtgttgctgttttcaaagttnnnnnnnc 656
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 115 agcacaagaacgactttcaaaactctctggtggtgttgctgttttcaaagttgggggggc 174
Query: 657 tagtgagtcagaagtcggggaaaggaaagatagagtgacagatgcgttaaatgccacaag 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tagtgagtcagaagtcggggaaaggaaagatagagtgacagatgcgttaaatgccacaag 234
Query: 717 agcagcggtagaggagggtattgttccaggtggtggagtcgctctcttatatgctaccaa 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agcagcggtagaggagggtattgttccaggtggtggagtcgctctcttatatgctaccaa 294
Query: 777 agtcttggagaaccttgaaactaaaaacgaggatgagaaaagaggagtacagattattca 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agtcttggagaaccttgaaactaaaaacgaggatgagaaaagaggagtacagattattca 354
Query: 837 gaacgcacttaaggctcctacagtcacaatagctgcaaatgctggttttgatggttcttt 896
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 355 gaacgcacttaaggctcctacagtcaccatagttgcaaatgctggttttgatggttcttt 414
Query: 897 ggttcaaaacaaattgttggaacaggatgatcataatttgggttttgatgctgctaaagg 956
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 415 ggttcaaaaccaattgttggaacaggatgatcataatttgggttttgatgctgctacagg 474
Query: 957 aacctatgttgatatggtgaaggctggaattatagatcctctgaaagttgttagaacagc 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aacctatgttgatatggtgaaggctggaattatagatcctctgaaagttgttagaacagc 534
Query: 1017 tctggtagatgctgccagtgtgtcattgctacttacgaccatggaggcagctgtggtgga 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tctggtagatgctgccagtgtgtcattgctacttacgaccatggaggcagctgtggtgga 594
Query: 1077 gaacccgaataacaaaaataaatcgccaagcccggtagcggatatggatgatttggacta 1136
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaacccgaataaccaaaataaatcgccaagcccggtagcggatatggatgatttggacta 654
Query: 1137 ttaa 1140
||||
Sbjct: 655 ttaa 658
>gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin CPN60-like 2,
mitochondrial precursor; n=2; Brassicaceae|Rep:
Chaperonin CPN60-like 2, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (55%)
Length = 1212
Score = 486 bits (245), Expect = e-136
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 239 gaccactcctagttgttgcggaagatgttgaaagtgatgcattggctatgctcatactca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 gaccactcctagttgttgcggaagatgttgaaagtgatgcattggctatgctcatactca 1027
Query: 299 acaagcatcatgctgggcttaaggtttgtgccataaaagctcctggctttggggatagca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 acaagcatcatgctgggcttaaggtttgtgccataaaagctcctggctttggggatagca 1087
Query: 359 gaaaagcaaatttagatgaccttgcaattcttactggaggagaggtcatcacggaagatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 gaaaagcaaatttagatgaccttgcaattcttactggaggagaggtcatcacggaagatc 1147
Query: 419 gcggttttactcttgacaaagtccaaccagaattgcttggcactgcaaaaaaggttactg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 gcggttttactcttgacaaagtccaaccagaattgcttggcactgcaaaaaaggttactg 1207
Query: 479 tctcc 483
|||||
Sbjct: 1208 tctcc 1212
Score = 402 bits (203), Expect = e-111
Identities = 227/231 (98%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 1 atggagaaagtcgggaaggaaggaataatcactgttgctgacggaaatacgttagagaac 60
|||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||| |
Sbjct: 643 atggagaaagtcgggaaggaag-aataatcactgttgctgacggaa-tacgtttgaga-c 699
Query: 61 gagttggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gagttggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttatt 759
Query: 121 actgatcagaagacccagaaatgtgaattggagaacccctttatcctcatccatgacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 actgatcagaagacccagaaatgtgaattggagaacccctttatcctcatccatgacaag 819
Query: 181 aaaatttcagacataaattcactgttgaaaatattggagctggcagtcacg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aaaatttcagacataaattcactgttgaaaatattggagctggcagtcacg 870
>gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperonin CPN60,
mitochondrial precursor; n=1; Brassica napus|Rep:
Chaperonin CPN60, mitochondrial precursor - Brassica
napus (Rape), partial (15%)
Length = 702
Score = 65.9 bits (33), Expect = 5e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 65 tggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttattactg 124
||||||| || ||||||||||||| | || |||||||||||||||||||| || ||
Sbjct: 368 tggaagtagttgaaggaatgaagcctgacaggggctacatatctccttatttcataacaa 427
Query: 125 atcagaagacccagaaatgtgaattggag 153
||||||||| ||||||| ||||| |||||
Sbjct: 428 atcagaagaaccagaaacgtgaactggag 456