Miyakogusa Predicted Gene
- Lj3g3v2692920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2692920.1 Non Chatacterized Hit- tr|I1KGB8|I1KGB8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44550
PE,83.15,0,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1; Cpn60_TCP1,Chaperonin Cpn60/TCP-1; G,CUFF.44407.1
(855 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin... 1631 0.0
gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-li... 78 1e-13
gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperoni... 66 4e-10
>gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin CPN60-like 2,
mitochondrial precursor; n=2; Brassicaceae|Rep:
Chaperonin CPN60-like 2, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (55%)
Length = 1212
Score = 1631 bits (823), Expect = 0.0
Identities = 850/855 (99%), Gaps = 3/855 (0%)
Strand = Plus / Plus
Query: 1 atgtatcgattggcagctaaactagcttcttccaccttaaagaacaacaaccccgtgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgtatcgattggcagctaaactagcttcttccaccttaaagaacaacaaccccgtgtat 123
Query: 61 aggggggtgttgtcaagaagaaattatgtggccaaagatatcagcttcggggtcggggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aggggggtgttgtcaagaagaaattatgtggccaaagatatcagcttcggggtcggggct 183
Query: 121 cgtgctgctatattgcagggtgtctctgaagttgctgaggctgtcaaagttaccatggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgtgctgctatattgcagggtgtctctgaagttgctgaggctgtcaaagttaccatggga 243
Query: 181 cccaagggtcgcaatgtgataattgagaaaagccacaggaatccaagggtcacgaaggat 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 cccaagggtcgcaatgtgataattgagaaaagccacaggaatccgagggtcacgaaggat 303
Query: 241 ggcgtgactgtagccaaaagtatcagctttgaagataaagctaaaaatattggtgctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggcgtgactgtagccaaaagtatcagctttgaagataaagctaaaaatattggtgctggt 363
Query: 301 ctcgtcaagcaggtggcgaaggctaccaacactgctgctggagacggtacaacttgtgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctcgtcaagcaggtggcgaaggctaccaacactgctgctggagacggtacaacttgtgca 423
Query: 361 actgttttgactcaggcaatactcacagaaggttgcaaatctgttgctgctggagtaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 actgttttgactcaggcaatactcacagaaggttgcaaatctgttgctgctggagtaaat 483
Query: 421 gtcatggatttgcgtaatggaataaataaggcagttgctgctgtaattactgatttaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtcatggatttgcgtaatggaataaataaggcagttgctgctgtaattactgatttaaaa 543
Query: 481 agcagagcagtaatgataagcacacctgaagagataacccaggttggaaccatatctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agcagagcagtaatgataagcacacctgaagagataacccaggttggaaccatatctgct 603
Query: 541 aatggggagcgtgaaattggagaattgatagcaagagcaatggagaaagtcgggaaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aatggggagcgtgaaattggagaattgatagcaagagcaatggagaaagtcgggaaggaa 663
Query: 601 ggaataatcactgttgctgacggaaatacgttagagaacgagttggaagtggtagaagga 660
|||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||
Sbjct: 664 -gaataatcactgttgctgacgg-aatacgtttgag-acgagttggaagtggtagaagga 720
Query: 661 atgaagctagctagaggctacatatctccttattttattactgatcagaagacccagaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgaagctagctagaggctacatatctccttattttattactgatcagaagacccagaaa 780
Query: 721 tgtgaattggagaacccctttatcctcatccatgacaagaaaatttcagacataaattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtgaattggagaacccctttatcctcatccatgacaagaaaatttcagacataaattca 840
Query: 781 ctgttgaaaatattggagctggcagtcacggtggataagccaatcttgattcattgtgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctgttgaaaatattggagctggcagtcacggtggataagccaatcttgattcattgtgct 900
Query: 841 cattttcaattgtaa 855
|||||||||||||||
Sbjct: 901 cattttcaattgtaa 915
>gnl|LJGI|TC69512 homologue to UniRef100_Q1RSH3 Cluster: GroEL-like chaperone,
ATPase; n=1; Medicago truncatula|Rep: GroEL-like
chaperone, ATPase - Medicago truncatula (Barrel medic),
partial (37%)
Length = 757
Score = 77.8 bits (39), Expect = 1e-13
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 481 agcagagcagtaatgataagcacacctgaagagataacccaggttggaaccatatctgct 540
||||||||| |||||| ||||| ||||||| ||| | |||||||| || |||||||||
Sbjct: 605 agcagagcacgaatgattagcacttctgaagaaatagctcaggttgggacaatatctgct 664
Query: 541 aatggggagcgtgaaattggagaattgatagcaagagcaatggagaaagtcgggaaggaa 600
||||||||| | || ||||| ||||| || |||| ||| ||||||||||| || || |||
Sbjct: 665 aatggggagagagagattggtgaattaattgcaaaagctatggagaaagttggcaaagaa 724
Query: 601 ggaataatcac 611
|| |||||||
Sbjct: 725 ggtgtaatcac 735
>gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperonin CPN60,
mitochondrial precursor; n=1; Brassica napus|Rep:
Chaperonin CPN60, mitochondrial precursor - Brassica
napus (Rape), partial (15%)
Length = 702
Score = 65.9 bits (33), Expect = 4e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 644 tggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttattactg 703
||||||| || ||||||||||||| | || |||||||||||||||||||| || ||
Sbjct: 368 tggaagtagttgaaggaatgaagcctgacaggggctacatatctccttatttcataacaa 427
Query: 704 atcagaagacccagaaatgtgaattggag 732
||||||||| ||||||| ||||| |||||
Sbjct: 428 atcagaagaaccagaaacgtgaactggag 456